Difference between revisions of "TSS:Hg 104772.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|KSP37= | |KSP37= | ||
| − | |all_trans= | + | |all_trans=BX538120:-33 ENST00000544540.5:68 NM_001345926:68 BC127789:68 BC127790:68 ENST00000389583.5:89 NM_001123376:89 AB235418:113 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance=- | + | |distance=-33 |
|distance_to_tss=-85 | |distance_to_tss=-85 | ||
|end=44911248 | |end=44911248 | ||
| Line 10: | Line 10: | ||
|entrez_id=643236 | |entrez_id=643236 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=C10orf127 | + | |gene_alias=C10orf127{{!}}KSP37 |
|gene_description=transmembrane protein 72 | |gene_description=transmembrane protein 72 | ||
|gene_id=643236 | |gene_id=643236 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:31658 | |hgnc_mgi_id=HGNC:31658 | ||
|nearest_ensembl=ENSG00000187783 | |nearest_ensembl=ENSG00000187783 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001345926 |
|nearest_refseq=NM_001123376 | |nearest_refseq=NM_001123376 | ||
|nearest_unigene=Hs.292788 | |nearest_unigene=Hs.292788 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=44911214 | |start=44911214 | ||
|start_of_center_position=44911231 | |start_of_center_position=44911231 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BX538120 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104772.1 | |tss_id=hg_104772.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44911231 |
|---|---|
| End of the center position in the TSS region: | 44911232 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX538120 |
|---|---|
| Distance: | -33 |
| Num_trans: | 8 |
| All_trans: | BX538120:-33 ENST00000544540.5:68 NM_001345926:68 BC127789:68 BC127790:68 ENST00000389583.5:89 NM_001123376:89 AB235418:113 |
TATA-Box annotation
| Distance to TSS: | -85 |
|---|---|
| Nearest PromoterID: | NM_001345926 |
| Entrez ID: | 643236 |
| Nearest Unigene: | Hs.292788 |
| Nearest Refseq: | NM_001123376 |
| Nearest Ensembl: | ENSG00000187783 |
| Gene Name: | transmembrane protein 72 |
| Gene Alias: | C10orf127|KSP37 |
| Gene Description: | transmembrane protein 72 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
