Difference between revisions of "TSS:Hg 104783.1"
From referenceTSS
| Line 3: | Line 3: | ||
|ZNF422= | |ZNF422= | ||
|Zfp422= | |Zfp422= | ||
| − | |all_trans= | + | |all_trans=BC041139:-25 ENST00000298299.4:395 NM_006963:395 AK312278:395 AK291508:395 BC053687:403 BC010642:407 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance=- | + | |distance=-25 |
| − | |distance_to_tss= | + | |distance_to_tss=397 |
|end=45000528 | |end=45000528 | ||
|end_of_center_position=45000514 | |end_of_center_position=45000514 | ||
| − | |entrez_id= | + | |entrez_id=220979 |
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=chromosome 10 open reading frame 25 |
|gene_id=7570 | |gene_id=7570 | ||
|gene_name=zinc finger protein 22 | |gene_name=zinc finger protein 22 | ||
| Line 21: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13012 | |hgnc_mgi_id=HGNC:13012 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_126421 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001039380 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.707791 |
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=45000498 | |start=45000498 | ||
|start_of_center_position=45000513 | |start_of_center_position=45000513 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC041139 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104783.1 | |tss_id=hg_104783.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45000513 |
|---|---|
| End of the center position in the TSS region: | 45000514 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC041139 |
|---|---|
| Distance: | -25 |
| Num_trans: | 7 |
| All_trans: | BC041139:-25 ENST00000298299.4:395 NM_006963:395 AK312278:395 AK291508:395 BC053687:403 BC010642:407 |
TATA-Box annotation
| Distance to TSS: | 397 |
|---|---|
| Nearest PromoterID: | NR_126421 |
| Entrez ID: | 220979 |
| Nearest Unigene: | Hs.707791 |
| Nearest Refseq: | NM_001039380 |
| Nearest Ensembl: | |
| Gene Name: | zinc finger protein 22 |
| Gene Alias: | - |
| Gene Description: | chromosome 10 open reading frame 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
