Difference between revisions of "TSS:Hg 104795.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF030162:0 AY442341:0 BC066951:0 AK223331:0 AK304883:2 NR_073030:-33 NR_073029 | + | |all_trans=ENST00000580018.4:0 NM_006327:0 AF030162:0 AY442341:0 BC066951:0 AK223331:0 AK304883:2 NR_073030:-33 NR_073029:-33 BC062707:-33 CU687598:106 CU688220:106 HQ448532:106 KJ893034:106 KJ902104:106 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=13 |
|end=45972518 | |end=45972518 | ||
|end_of_center_position=45972502 | |end_of_center_position=45972502 | ||
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|hgnc_mgi_id=HGNC:17312 | |hgnc_mgi_id=HGNC:17312 | ||
|nearest_ensembl=ENSG00000265354 | |nearest_ensembl=ENSG00000265354 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006327 |
|nearest_refseq=NM_006327 | |nearest_refseq=NM_006327 | ||
|nearest_unigene=Hs.524308 | |nearest_unigene=Hs.524308 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=45972485 | |start=45972485 | ||
|start_of_center_position=45972501 | |start_of_center_position=45972501 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AF030162 AY442341 BC066951 AK223331 | + | |transcript_name=ENST00000580018.4 NM_006327 AF030162 AY442341 BC066951 AK223331 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104795.1 | |tss_id=hg_104795.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=O14925 |
}} | }} | ||
Revision as of 17:59, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 45972501 |
|---|---|
| End of the center position in the TSS region: | 45972502 |
Gene and protein annotation
|
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Transcript annotation
| Transcript_name: | ENST00000580018.4 NM_006327 AF030162 AY442341 BC066951 AK223331 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000580018.4:0 NM_006327:0 AF030162:0 AY442341:0 BC066951:0 AK223331:0 AK304883:2 NR_073030:-33 NR_073029:-33 BC062707:-33 CU687598:106 CU688220:106 HQ448532:106 KJ893034:106 KJ902104:106 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_006327 |
| Entrez ID: | 100287932 |
| Nearest Unigene: | Hs.524308 |
| Nearest Refseq: | NM_006327 |
| Nearest Ensembl: | ENSG00000265354 |
| Gene Name: | translocase of inner mitochondrial membrane 23 |
| Gene Alias: | TIM23 |
| Gene Description: | translocase of inner mitochondrial membrane 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
