Difference between revisions of "TSS:Hg 104861.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000360890.6:19 | + | |all_trans=NM_001370154:16 NM_001370153:16 ENST00000360890.6:19 ENST00000325239.11:19 BC034937:19 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=16 |
| − | |distance_to_tss=- | + | |distance_to_tss=-22 |
|end=48684857 | |end=48684857 | ||
|end_of_center_position=48684852 | |end_of_center_position=48684852 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29323 | |hgnc_mgi_id=HGNC:29323 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000128815 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370154 |
|nearest_refseq=NM_020945 | |nearest_refseq=NM_020945 | ||
|nearest_unigene=Hs.287379 | |nearest_unigene=Hs.287379 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=48684845 | |start=48684845 | ||
|start_of_center_position=48684851 | |start_of_center_position=48684851 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001370154 NM_001370153 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104861.1 | |tss_id=hg_104861.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:00, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48684851 |
|---|---|
| End of the center position in the TSS region: | 48684852 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001370154 NM_001370153 |
|---|---|
| Distance: | 16 |
| Num_trans: | 5 |
| All_trans: | NM_001370154:16 NM_001370153:16 ENST00000360890.6:19 ENST00000325239.11:19 BC034937:19 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001370154 |
| Entrez ID: | 57705 |
| Nearest Unigene: | Hs.287379 |
| Nearest Refseq: | NM_020945 |
| Nearest Ensembl: | ENSG00000128815 |
| Gene Name: | WDFY family member 4 |
| Gene Alias: | C10orf64 |
| Gene Description: | WDFY family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
