Difference between revisions of "TSS:Hg 105235.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MAWBP= | |MAWBP= | ||
|MAWDBP= | |MAWDBP= | ||
| + | |all_trans=NM_001322449:-320 NM_001322441:-320 NM_001322437:-320 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-320 |
| − | |distance_to_tss=- | + | |distance_to_tss=-211 |
|end=68333145 | |end=68333145 | ||
|end_of_center_position=68333139 | |end_of_center_position=68333139 | ||
|entrez_id=64081 | |entrez_id=64081 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=HEL-S-306 | + | |gene_alias=HEL-S-306{{!}}MAWBP{{!}}MAWDBP |
|gene_description=phenazine biosynthesis like protein domain containing | |gene_description=phenazine biosynthesis like protein domain containing | ||
| − | |gene_name= | + | |gene_id=3189 |
| + | |gene_name=heterogeneous nuclear ribonucleoprotein H3 | ||
| + | |gene_source=HGNC:5043 | ||
| + | |gene_symbol=HNRNPH3 | ||
| + | |gene_synonyms=2H9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5043 | ||
|nearest_ensembl=ENSG00000108187 | |nearest_ensembl=ENSG00000108187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001033083 |
|nearest_refseq=NM_022129 | |nearest_refseq=NM_022129 | ||
|nearest_unigene=Hs.198158 | |nearest_unigene=Hs.198158 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=68333132 | |start=68333132 | ||
|start_of_center_position=68333138 | |start_of_center_position=68333138 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001322449 NM_001322441 NM_001322437 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105235.1 | |tss_id=hg_105235.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=P31942 | ||
}} | }} | ||
Revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68333138 |
|---|---|
| End of the center position in the TSS region: | 68333139 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001322449 NM_001322441 NM_001322437 |
|---|---|
| Distance: | -320 |
| Num_trans: | 3 |
| All_trans: | NM_001322449:-320 NM_001322441:-320 NM_001322437:-320 |
TATA-Box annotation
| Distance to TSS: | -211 |
|---|---|
| Nearest PromoterID: | NM_001033083 |
| Entrez ID: | 64081 |
| Nearest Unigene: | Hs.198158 |
| Nearest Refseq: | NM_022129 |
| Nearest Ensembl: | ENSG00000108187 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Alias: | HEL-S-306|MAWBP|MAWDBP |
| Gene Description: | phenazine biosynthesis like protein domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
