Difference between revisions of "TSS:Hg 105243.1"
From referenceTSS
| Line 6: | Line 6: | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=112 | |distance=112 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-8781 |
|end=68341712 | |end=68341712 | ||
|end_of_center_position=68341710 | |end_of_center_position=68341710 | ||
|entrez_id=64081 | |entrez_id=64081 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=HEL-S-306 | + | |gene_alias=HEL-S-306{{!}}MAWBP{{!}}MAWDBP |
|gene_description=phenazine biosynthesis like protein domain containing | |gene_description=phenazine biosynthesis like protein domain containing | ||
|gene_id=3189 | |gene_id=3189 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:5043 | |hgnc_mgi_id=HGNC:5043 | ||
|nearest_ensembl=ENSG00000108187 | |nearest_ensembl=ENSG00000108187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001033083 |
|nearest_refseq=NM_022129 | |nearest_refseq=NM_022129 | ||
|nearest_unigene=Hs.198158 | |nearest_unigene=Hs.198158 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=68341709 | |start_of_center_position=68341709 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=40(CTTTTTAAAGAT,+,0.00) |
|transcript_name=AF052131 | |transcript_name=AF052131 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68341709 |
|---|---|
| End of the center position in the TSS region: | 68341710 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF052131 |
|---|---|
| Distance: | 112 |
| Num_trans: | 1 |
| All_trans: | AF052131:112 |
TATA-Box annotation
| Distance to TSS: | -8781 |
|---|---|
| Nearest PromoterID: | NM_001033083 |
| Entrez ID: | 64081 |
| Nearest Unigene: | Hs.198158 |
| Nearest Refseq: | NM_022129 |
| Nearest Ensembl: | ENSG00000108187 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Alias: | HEL-S-306|MAWBP|MAWDBP |
| Gene Description: | phenazine biosynthesis like protein domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 40(CTTTTTAAAGAT,+,0.00) |
