Difference between revisions of "TSS:Hg 105259.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000630771.2 | + | |all_trans=ENST00000630771.2:49 ENST00000536391.5:-61 AK023438:119 AF465616:119 ENST00000538031.5:121 AK307550:130 ENST00000543719.5:131 AK298004:131 ENST00000541012.5:132 BC058846:134 AK001701:141 AY249140:141 ENST00000543229.5:144 ENST00000539539.5:144 ENST00000265872.11:144 NR_104262:144 NM_001282960:144 NM_001282959:144 NM_018237:144 AK292649:144 AK307704:144 AK122871:144 AK299307:144 ENST00000543225.5:147 ENST00000536012.5:147 AK307671:147 BX647943:147 ENST00000494903.2:157 ENST00000540210.5:160 BC130626:160 BC132725:160 BC144118:160 BC108682:171 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=49 | |distance=49 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-155 |
|end=68721095 | |end=68721095 | ||
|end_of_center_position=68721084 | |end_of_center_position=68721084 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:24236 | |hgnc_mgi_id=HGNC:24236 | ||
|nearest_ensembl=ENSG00000060339 | |nearest_ensembl=ENSG00000060339 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_018237 |
|nearest_refseq=NM_018237 | |nearest_refseq=NM_018237 | ||
|nearest_unigene=Hs.49853 | |nearest_unigene=Hs.49853 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=68721072 | |start=68721072 | ||
|start_of_center_position=68721083 | |start_of_center_position=68721083 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000630771.2 | + | |transcript_name=ENST00000630771.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105259.1 | |tss_id=hg_105259.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=F5H3E1 | + | |uniprot_id=F5H3E1 |
}} | }} | ||
Revision as of 18:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68721083 |
|---|---|
| End of the center position in the TSS region: | 68721084 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000630771.2 |
|---|---|
| Distance: | 49 |
| Num_trans: | 33 |
| All_trans: | ENST00000630771.2:49 ENST00000536391.5:-61 AK023438:119 AF465616:119 ENST00000538031.5:121 AK307550:130 ENST00000543719.5:131 AK298004:131 ENST00000541012.5:132 BC058846:134 AK001701:141 AY249140:141 ENST00000543229.5:144 ENST00000539539.5:144 ENST00000265872.11:144 NR_104262:144 NM_001282960:144 NM_001282959:144 NM_018237:144 AK292649:144 AK307704:144 AK122871:144 AK299307:144 ENST00000543225.5:147 ENST00000536012.5:147 AK307671:147 BX647943:147 ENST00000494903.2:157 ENST00000540210.5:160 BC130626:160 BC132725:160 BC144118:160 BC108682:171 |
TATA-Box annotation
| Distance to TSS: | -155 |
|---|---|
| Nearest PromoterID: | NM_018237 |
| Entrez ID: | 55749 |
| Nearest Unigene: | Hs.49853 |
| Nearest Refseq: | NM_018237 |
| Nearest Ensembl: | ENSG00000060339 |
| Gene Name: | cell division cycle and apoptosis regulator 1 |
| Gene Alias: | - |
| Gene Description: | cell division cycle and apoptosis regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
