Difference between revisions of "TSS:Hg 105260.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000538031.5:0 ENST00000543719.5:0 ENST00000541012.5:0 ENST00000543229.5:0 ENST00000539539.5:0 ENST00000265872.11:0 ENST00000543225.5:0 ENST00000536012.5:0 ENST00000494903.2:0 NR_104262:0 NM_001282960:0 NM_001282959:0 NM_018237:0 AK023438:0 AF465616:0 AK307550:0 AK298004:0 BC058846:0 AK001701:0 AY249140:0 AK292649:0 AK307704:0 AK122871:0 AK299307:0 AK307671:0 BX647943:0 ENST00000540210.5:2 BC130626:2 BC132725:2 BC144118:2 BC108682:13 ENST00000630771.2:-63 ENST00000536391.5:-195 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-9 |
|end=68721253 | |end=68721253 | ||
|end_of_center_position=68721230 | |end_of_center_position=68721230 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018237 | |nearest_refseq=NM_018237 | ||
|nearest_unigene=Hs.49853 | |nearest_unigene=Hs.49853 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=68721206 | |start=68721206 | ||
|start_of_center_position=68721229 | |start_of_center_position=68721229 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000538031.5 ENST00000543719.5 ENST00000541012.5 ENST00000543229.5 ENST00000539539.5 ENST00000265872.11 ENST00000543225.5 ENST00000536012.5 ENST00000494903.2 NR_104262 NM_001282960 NM_001282959 NM_018237 AK023438 AF465616 AK307550 AK298004 BC058846 AK001701 AY249140 AK292649 AK307704 AK122871 AK299307 AK307671 BX647943 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105260.1 | |tss_id=hg_105260.1 | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68721229 |
|---|---|
| End of the center position in the TSS region: | 68721230 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000538031.5 ENST00000543719.5 ENST00000541012.5 ENST00000543229.5 ENST00000539539.5 ENST00000265872.11 ENST00000543225.5 ENST00000536012.5 ENST00000494903.2 NR_104262 NM_001282960 NM_001282959 NM_018237 AK023438 AF465616 AK307550 AK298004 BC058846 AK001701 AY249140 AK292649 AK307704 AK122871 AK299307 AK307671 BX647943 |
|---|---|
| Distance: | 0 |
| Num_trans: | 33 |
| All_trans: | ENST00000538031.5:0 ENST00000543719.5:0 ENST00000541012.5:0 ENST00000543229.5:0 ENST00000539539.5:0 ENST00000265872.11:0 ENST00000543225.5:0 ENST00000536012.5:0 ENST00000494903.2:0 NR_104262:0 NM_001282960:0 NM_001282959:0 NM_018237:0 AK023438:0 AF465616:0 AK307550:0 AK298004:0 BC058846:0 AK001701:0 AY249140:0 AK292649:0 AK307704:0 AK122871:0 AK299307:0 AK307671:0 BX647943:0 ENST00000540210.5:2 BC130626:2 BC132725:2 BC144118:2 BC108682:13 ENST00000630771.2:-63 ENST00000536391.5:-195 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_018237 |
| Entrez ID: | 55749 |
| Nearest Unigene: | Hs.49853 |
| Nearest Refseq: | NM_018237 |
| Nearest Ensembl: | ENSG00000060339 |
| Gene Name: | cell division cycle and apoptosis regulator 1 |
| Gene Alias: | - |
| Gene Description: | cell division cycle and apoptosis regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
