Difference between revisions of "TSS:Hg 105404.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SPL= | |SPL= | ||
| − | |all_trans=AJ011304:-1 | + | |all_trans=AJ011304:-1 AB033078:-63 ENST00000486993.1:-72 BC051238:-72 BC068061:-72 BC052991:-73 ENST00000373202.8:-85 NM_003901:-85 LF385457:-85 MA621034:-85 LF208760:-86 MA444337:-86 LF322579:167 MA558156:167 LF322578:287 MA558155:287 AK314615:343 LF322577:359 MA558154:359 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 10: | Line 10: | ||
|entrez_id=8879 | |entrez_id=8879 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=S1PL | + | |gene_alias=NPHS14{{!}}S1PL{{!}}SPL |
|gene_description=sphingosine-1-phosphate lyase 1 | |gene_description=sphingosine-1-phosphate lyase 1 | ||
|gene_id=8879 | |gene_id=8879 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003901 | |nearest_refseq=NM_003901 | ||
|nearest_unigene=Hs.499984 | |nearest_unigene=Hs.499984 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=70816032 | |start=70816032 | ||
Revision as of 18:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70816036 |
|---|---|
| End of the center position in the TSS region: | 70816037 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AJ011304 |
|---|---|
| Distance: | -1 |
| Num_trans: | 19 |
| All_trans: | AJ011304:-1 AB033078:-63 ENST00000486993.1:-72 BC051238:-72 BC068061:-72 BC052991:-73 ENST00000373202.8:-85 NM_003901:-85 LF385457:-85 MA621034:-85 LF208760:-86 MA444337:-86 LF322579:167 MA558156:167 LF322578:287 MA558155:287 AK314615:343 LF322577:359 MA558154:359 |
TATA-Box annotation
| Distance to TSS: | 89 |
|---|---|
| Nearest PromoterID: | NM_003901 |
| Entrez ID: | 8879 |
| Nearest Unigene: | Hs.499984 |
| Nearest Refseq: | NM_003901 |
| Nearest Ensembl: | ENSG00000166224 |
| Gene Name: | sphingosine-1-phosphate lyase 1 |
| Gene Alias: | NPHS14|S1PL|SPL |
| Gene Description: | sphingosine-1-phosphate lyase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
