Difference between revisions of "TSS:Hg 105512.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CCDC109A= | |CCDC109A= | ||
|HsMCU= | |HsMCU= | ||
| − | |all_trans=ENST00000373053.7:9 | + | |all_trans=ENST00000373053.7:9 NM_001270679:9 NR_073062:9 NM_138357:9 BC034235:9 ENST00000603649.5:21 ENST00000604372.5:21 ENST00000604679.5:21 ENST00000357157.10:21 AK311133:21 AK310455:21 AK075439:21 AK315519:26 AK301475:28 JF432665:30 BC010682:52 ENST00000605597.5:497 ENST00000536019.5:497 NM_001270680:497 AK128016:497 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 11: | Line 11: | ||
|entrez_id=90550 | |entrez_id=90550 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=C10orf42 | + | |gene_alias=C10orf42{{!}}CCDC109A{{!}}HsMCU |
|gene_description=mitochondrial calcium uniporter | |gene_description=mitochondrial calcium uniporter | ||
|gene_id=90550 | |gene_id=90550 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:23526 | |hgnc_mgi_id=HGNC:23526 | ||
|nearest_ensembl=ENSG00000156026 | |nearest_ensembl=ENSG00000156026 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001270679 |
|nearest_refseq=NM_138357 | |nearest_refseq=NM_138357 | ||
|nearest_unigene=Hs.591366 | |nearest_unigene=Hs.591366 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=72692115 | |start=72692115 | ||
|start_of_center_position=72692118 | |start_of_center_position=72692118 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000373053.7 NM_138357 | + | |transcript_name=ENST00000373053.7 NM_001270679 NR_073062 NM_138357 BC034235 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105512.1 | |tss_id=hg_105512.1 | ||
Revision as of 18:15, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72692118 |
|---|---|
| End of the center position in the TSS region: | 72692119 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373053.7 NM_001270679 NR_073062 NM_138357 BC034235 |
|---|---|
| Distance: | 9 |
| Num_trans: | 20 |
| All_trans: | ENST00000373053.7:9 NM_001270679:9 NR_073062:9 NM_138357:9 BC034235:9 ENST00000603649.5:21 ENST00000604372.5:21 ENST00000604679.5:21 ENST00000357157.10:21 AK311133:21 AK310455:21 AK075439:21 AK315519:26 AK301475:28 JF432665:30 BC010682:52 ENST00000605597.5:497 ENST00000536019.5:497 NM_001270680:497 AK128016:497 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001270679 |
| Entrez ID: | 90550 |
| Nearest Unigene: | Hs.591366 |
| Nearest Refseq: | NM_138357 |
| Nearest Ensembl: | ENSG00000156026 |
| Gene Name: | mitochondrial calcium uniporter |
| Gene Alias: | C10orf42|CCDC109A|HsMCU |
| Gene Description: | mitochondrial calcium uniporter |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
