Difference between revisions of "TSS:Hg 105524.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000469925 | + | |all_trans=ENST00000469925.1:0 AK303235:0 AK309755:0 AK316538:0 AK300980:0 ENST00000372997.3:1 BC046173:1 BC038833:7 ENST00000488223.5:-37 ENST00000349051.9:-37 BC031224:-37 ENST00000357321.9:-41 NM_001283019:-41 NM_015901:-41 NR_104264:-41 NM_001283014:-41 NM_001283015:-41 LF384965:-44 MA620542:-44 ENST00000617744.4:-121 ENST00000544879.5:-121 ENST00000537969.5:-121 NM_001283017:-121 NM_001283016:-121 LF333125:280 MA568702:280 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=57 |
|end=73110529 | |end=73110529 | ||
|end_of_center_position=73110513 | |end_of_center_position=73110513 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:18827 | |hgnc_mgi_id=HGNC:18827 | ||
|nearest_ensembl=ENSG00000166321 | |nearest_ensembl=ENSG00000166321 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001283014 |
|nearest_refseq=NM_015901 | |nearest_refseq=NM_015901 | ||
|nearest_unigene=Hs.533657 | |nearest_unigene=Hs.533657 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=73110495 | |start=73110495 | ||
|start_of_center_position=73110512 | |start_of_center_position=73110512 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000469925 | + | |transcript_name=ENST00000469925.1 AK303235 AK309755 AK316538 AK300980 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105524.1 | |tss_id=hg_105524.1 | ||
Revision as of 18:16, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 73110512 |
|---|---|
| End of the center position in the TSS region: | 73110513 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000469925.1 AK303235 AK309755 AK316538 AK300980 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000469925.1:0 AK303235:0 AK309755:0 AK316538:0 AK300980:0 ENST00000372997.3:1 BC046173:1 BC038833:7 ENST00000488223.5:-37 ENST00000349051.9:-37 BC031224:-37 ENST00000357321.9:-41 NM_001283019:-41 NM_015901:-41 NR_104264:-41 NM_001283014:-41 NM_001283015:-41 LF384965:-44 MA620542:-44 ENST00000617744.4:-121 ENST00000544879.5:-121 ENST00000537969.5:-121 NM_001283017:-121 NM_001283016:-121 LF333125:280 MA568702:280 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NM_001283014 |
| Entrez ID: | 25961 |
| Nearest Unigene: | Hs.533657 |
| Nearest Refseq: | NM_015901 |
| Nearest Ensembl: | ENSG00000166321 |
| Gene Name: | nudix hydrolase 13 |
| Gene Alias: | - |
| Gene Description: | nudix hydrolase 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
