Difference between revisions of "TSS:Hg 10553.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000457075.1:0 NR_135058:0 NR_135059 | + | |all_trans=ENST00000457075.1:0 NR_135058:0 NR_135059:0 BC070363:0 ENST00000416869.1:7 ENST00000671472.1:-19 ENST00000666544.1:60 ENST00000654227.1:131 ENST00000660464.1:148 NR_135056:171 NR_135057:171 ENST00000422124.1:276 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_135056 | |nearest_refseq=NR_135056 | ||
|nearest_unigene=Hs.465405 | |nearest_unigene=Hs.465405 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=16889648 | |start=16889648 | ||
|start_of_center_position=16889667 | |start_of_center_position=16889667 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000457075.1 NR_135058 NR_135059 | + | |transcript_name=ENST00000457075.1 NR_135058 NR_135059 BC070363 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10553.1 | |tss_id=hg_10553.1 | ||
Revision as of 18:16, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 16889667 |
|---|---|
| End of the center position in the TSS region: | 16889668 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000457075.1 NR_135058 NR_135059 BC070363 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000457075.1:0 NR_135058:0 NR_135059:0 BC070363:0 ENST00000416869.1:7 ENST00000671472.1:-19 ENST00000666544.1:60 ENST00000654227.1:131 ENST00000660464.1:148 NR_135056:171 NR_135057:171 ENST00000422124.1:276 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_135058 |
| Entrez ID: | 105376805 |
| Nearest Unigene: | Hs.465405 |
| Nearest Refseq: | NR_135056 |
| Nearest Ensembl: | ENSG00000238142 |
| Gene Name: | uncharacterized LOC105376805 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376805 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
