Difference between revisions of "TSS:Hg 105706.1"
From referenceTSS
| Line 3: | Line 3: | ||
|TRAFIP10= | |TRAFIP10= | ||
|ZIMP10= | |ZIMP10= | ||
| − | |all_trans=ENST00000334512. | + | |all_trans=ENST00000334512.10:0 NM_020338:0 BC007288:21 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=19 |
|end=79069014 | |end=79069014 | ||
|end_of_center_position=79068985 | |end_of_center_position=79068985 | ||
|entrez_id=57178 | |entrez_id=57178 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=MIZ | + | |gene_alias=MIZ{{!}}RAI17{{!}}TRAFIP10{{!}}ZIMP10 |
|gene_description=zinc finger MIZ-type containing 1 | |gene_description=zinc finger MIZ-type containing 1 | ||
|gene_id=57178 | |gene_id=57178 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_020338 | |nearest_refseq=NM_020338 | ||
|nearest_unigene=Hs.193118 | |nearest_unigene=Hs.193118 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=79068955 | |start=79068955 | ||
|start_of_center_position=79068984 | |start_of_center_position=79068984 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000334512. | + | |transcript_name=ENST00000334512.10 NM_020338 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105706.1 | |tss_id=hg_105706.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9ULJ6 |
}} | }} | ||
Revision as of 18:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79068984 |
|---|---|
| End of the center position in the TSS region: | 79068985 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000334512.10 NM_020338 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000334512.10:0 NM_020338:0 BC007288:21 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_020338 |
| Entrez ID: | 57178 |
| Nearest Unigene: | Hs.193118 |
| Nearest Refseq: | NM_020338 |
| Nearest Ensembl: | ENSG00000108175 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | MIZ|RAI17|TRAFIP10|ZIMP10 |
| Gene Description: | zinc finger MIZ-type containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
