Difference between revisions of "TSS:Hg 105846.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000372263. | + | |all_trans=ENST00000372263.4:0 NM_001331125:0 NM_001012973:0 HQ258029:20 KJ895824:20 EU446996:22 BC117332:-49 BC117334:-49 ENST00000372267.6:-132 BC066348:-221 BC090922:-221 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=80132737 | |end=80132737 | ||
|end_of_center_position=80132730 | |end_of_center_position=80132730 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=placenta | + | |gene_description=placenta associated 9 |
|gene_id=219348 | |gene_id=219348 | ||
| − | |gene_name=placenta | + | |gene_name=placenta associated 9 |
|gene_source=HGNC:19255 | |gene_source=HGNC:19255 | ||
|gene_symbol=PLAC9 | |gene_symbol=PLAC9 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001012973 | |nearest_refseq=NM_001012973 | ||
|nearest_unigene=Hs.204947 | |nearest_unigene=Hs.204947 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=80132722 | |start=80132722 | ||
|start_of_center_position=80132729 | |start_of_center_position=80132729 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000372263. | + | |transcript_name=ENST00000372263.4 NM_001331125 NM_001012973 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105846.1 | |tss_id=hg_105846.1 | ||
Revision as of 18:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80132729 |
|---|---|
| End of the center position in the TSS region: | 80132730 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372263.4 NM_001331125 NM_001012973 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000372263.4:0 NM_001331125:0 NM_001012973:0 HQ258029:20 KJ895824:20 EU446996:22 BC117332:-49 BC117334:-49 ENST00000372267.6:-132 BC066348:-221 BC090922:-221 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001331125 |
| Entrez ID: | 219348 |
| Nearest Unigene: | Hs.204947 |
| Nearest Refseq: | NM_001012973 |
| Nearest Ensembl: | ENSG00000189129 |
| Gene Name: | placenta associated 9 |
| Gene Alias: | - |
| Gene Description: | placenta associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
