Difference between revisions of "TSS:Hg 105945.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Gcap14= | |Gcap14= | ||
|KIAA1128= | |KIAA1128= | ||
| − | |all_trans=ENST00000224756.12 | + | |all_trans=ENST00000224756.12:0 AK298966:0 BC030528:11 ENST00000372088.8:-37 NM_001351292:-37 NM_001351290:-37 NM_018999:-37 NM_001284240:-37 NM_001284241:-37 ENST00000359979.8:-40 |
|bA486O22.1= | |bA486O22.1= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 12: | Line 12: | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=FAM190B | + | |gene_alias=FAM190B{{!}}Gcap14{{!}}KIAA1128{{!}}bA486O22.1 |
|gene_description=coiled-coil serine rich protein 2 | |gene_description=coiled-coil serine rich protein 2 | ||
|gene_id=54462 | |gene_id=54462 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:29197 | |hgnc_mgi_id=HGNC:29197 | ||
|nearest_ensembl=ENSG00000107771 | |nearest_ensembl=ENSG00000107771 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_018999 |
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=84328625 | |start=84328625 | ||
|start_of_center_position=84328652 | |start_of_center_position=84328652 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000224756.12 | + | |transcript_name=ENST00000224756.12 AK298966 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105945.1 | |tss_id=hg_105945.1 | ||
Revision as of 18:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 84328652 |
|---|---|
| End of the center position in the TSS region: | 84328653 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000224756.12 AK298966 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000224756.12:0 AK298966:0 BC030528:11 ENST00000372088.8:-37 NM_001351292:-37 NM_001351290:-37 NM_018999:-37 NM_001284240:-37 NM_001284241:-37 ENST00000359979.8:-40 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_018999 |
| Entrez ID: | 54462 |
| Nearest Unigene: | Hs.461988 |
| Nearest Refseq: | NM_018999 |
| Nearest Ensembl: | ENSG00000107771 |
| Gene Name: | coiled-coil serine rich protein 2 |
| Gene Alias: | FAM190B|Gcap14|KIAA1128|bA486O22.1 |
| Gene Description: | coiled-coil serine rich protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
