Difference between revisions of "TSS:Hg 105955.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Gcap14= | |Gcap14= | ||
|KIAA1128= | |KIAA1128= | ||
| − | |all_trans=ENST00000498300.5 | + | |all_trans=ENST00000498300.5:-16 |
|bA486O22.1= | |bA486O22.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-16 | |distance=-16 | ||
| − | |distance_to_tss= | + | |distance_to_tss=13395 |
|end=84438569 | |end=84438569 | ||
|end_of_center_position=84438564 | |end_of_center_position=84438564 | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=FAM190B | + | |gene_alias=FAM190B{{!}}Gcap14{{!}}KIAA1128{{!}}bA486O22.1 |
|gene_description=coiled-coil serine rich protein 2 | |gene_description=coiled-coil serine rich protein 2 | ||
|gene_id=54462 | |gene_id=54462 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=84438558 | |start=84438558 | ||
|start_of_center_position=84438563 | |start_of_center_position=84438563 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-45(CCCTATAGAGAA,+,0.00) |
| − | |transcript_name=ENST00000498300.5 | + | |transcript_name=ENST00000498300.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105955.1 | |tss_id=hg_105955.1 | ||
Revision as of 18:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 84438563 |
|---|---|
| End of the center position in the TSS region: | 84438564 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000498300.5 |
|---|---|
| Distance: | -16 |
| Num_trans: | 1 |
| All_trans: | ENST00000498300.5:-16 |
TATA-Box annotation
| Distance to TSS: | 13395 |
|---|---|
| Nearest PromoterID: | NM_001284242 |
| Entrez ID: | 54462 |
| Nearest Unigene: | Hs.461988 |
| Nearest Refseq: | NM_018999 |
| Nearest Ensembl: | ENSG00000107771 |
| Gene Name: | coiled-coil serine rich protein 2 |
| Gene Alias: | FAM190B|Gcap14|KIAA1128|bA486O22.1 |
| Gene Description: | coiled-coil serine rich protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -45(CCCTATAGAGAA,+,0.00) |
