Difference between revisions of "TSS:Hg 106092.1"
From referenceTSS
| Line 6: | Line 6: | ||
|FASTM= | |FASTM= | ||
|TNFRSF6= | |TNFRSF6= | ||
| − | |all_trans= | + | |all_trans=ENST00000355740.7:231 KJ958564:231 KM114217:231 BC012479:267 ENST00000612663.5:282 AK290978:331 X63717:357 AY495076:383 EU481974:383 M67454:383 ENST00000352159.8:387 ENST00000484444.5:431 ENST00000357339.6:478 ENST00000652046.1:498 NR_028036:498 NM_000043:498 NR_028034:498 NR_028033:498 NM_001320619:498 NM_152872:498 NM_152871:498 NR_028035:498 NR_135313:498 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=231 | |distance=231 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-517 |
|end=88990300 | |end=88990300 | ||
|end_of_center_position=88990282 | |end_of_center_position=88990282 | ||
|entrez_id=355 | |entrez_id=355 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=ALPS1A | + | |gene_alias=ALPS1A{{!}}APO-1{{!}}APT1{{!}}CD95{{!}}FAS1{{!}}FASTM{{!}}TNFRSF6 |
|gene_description=Fas cell surface death receptor | |gene_description=Fas cell surface death receptor | ||
|gene_id=355 | |gene_id=355 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=HGNC:11920 | |hgnc_mgi_id=HGNC:11920 | ||
|nearest_ensembl=ENSG00000026103 | |nearest_ensembl=ENSG00000026103 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_028035 |
|nearest_refseq=NM_000043 | |nearest_refseq=NM_000043 | ||
|nearest_unigene=Hs.244139 | |nearest_unigene=Hs.244139 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=88990262 | |start=88990262 | ||
|start_of_center_position=88990281 | |start_of_center_position=88990281 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000355740.7 KJ958564 KM114217 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106092.1 | |tss_id=hg_106092.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1B0QZF0 A0A1C6ZWA8 K9J972 |
}} | }} | ||
Revision as of 18:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88990281 |
|---|---|
| End of the center position in the TSS region: | 88990282 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000355740.7 KJ958564 KM114217 |
|---|---|
| Distance: | 231 |
| Num_trans: | 23 |
| All_trans: | ENST00000355740.7:231 KJ958564:231 KM114217:231 BC012479:267 ENST00000612663.5:282 AK290978:331 X63717:357 AY495076:383 EU481974:383 M67454:383 ENST00000352159.8:387 ENST00000484444.5:431 ENST00000357339.6:478 ENST00000652046.1:498 NR_028036:498 NM_000043:498 NR_028034:498 NR_028033:498 NM_001320619:498 NM_152872:498 NM_152871:498 NR_028035:498 NR_135313:498 |
TATA-Box annotation
| Distance to TSS: | -517 |
|---|---|
| Nearest PromoterID: | NR_028035 |
| Entrez ID: | 355 |
| Nearest Unigene: | Hs.244139 |
| Nearest Refseq: | NM_000043 |
| Nearest Ensembl: | ENSG00000026103 |
| Gene Name: | Fas cell surface death receptor |
| Gene Alias: | ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 |
| Gene Description: | Fas cell surface death receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
