Difference between revisions of "TSS:Hg 106094.1"
From referenceTSS
| Line 6: | Line 6: | ||
|FASTM= | |FASTM= | ||
|TNFRSF6= | |TNFRSF6= | ||
| − | |all_trans= | + | |all_trans=AK290978:0 X63717:0 AY495076:0 EU481974:0 M67454:0 ENST00000352159.8:2 ENST00000612663.5:-40 ENST00000484444.5:46 BC012479:-55 ENST00000355740.7:-91 KJ958564:-91 KM114217:-91 ENST00000357339.6:93 ENST00000652046.1:113 NR_028036:113 NM_000043:113 NR_028034:113 NR_028033:113 NM_001320619:113 NM_152872:113 NM_152871:113 NR_028035:113 NR_135313:113 ENST00000488877.5:167 ENST00000494410.5:167 ENST00000479522.5:167 X83490:167 X83491:167 X83492:167 X83493:167 DQ894675:189 KJ890693:191 KR709616:191 KR709617:191 KR709618:191 KR709619:191 ENST00000492756.5:192 ENST00000355279.2:192 X89101:192 CR450307:192 FJ200481:192 FJ373045:192 FJ373046:192 FM246457:192 FM246458:192 FM246459:192 Z47993:192 Z47994:192 Z47995:192 Z66556:192 Z70519:192 Z70520:192 ENST00000460510.5:275 ENST00000477270.5:335 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-145 |
|end=88990685 | |end=88990685 | ||
|end_of_center_position=88990654 | |end_of_center_position=88990654 | ||
|entrez_id=355 | |entrez_id=355 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=ALPS1A | + | |gene_alias=ALPS1A{{!}}APO-1{{!}}APT1{{!}}CD95{{!}}FAS1{{!}}FASTM{{!}}TNFRSF6 |
|gene_description=Fas cell surface death receptor | |gene_description=Fas cell surface death receptor | ||
|gene_id=355 | |gene_id=355 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=HGNC:11920 | |hgnc_mgi_id=HGNC:11920 | ||
|nearest_ensembl=ENSG00000026103 | |nearest_ensembl=ENSG00000026103 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_028035 |
|nearest_refseq=NM_000043 | |nearest_refseq=NM_000043 | ||
|nearest_unigene=Hs.244139 | |nearest_unigene=Hs.244139 | ||
| − | |num_trans= | + | |num_trans=54 |
|species=human | |species=human | ||
|start=88990621 | |start=88990621 | ||
|start_of_center_position=88990653 | |start_of_center_position=88990653 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK290978 X63717 AY495076 EU481974 M67454 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106094.1 | |tss_id=hg_106094.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=F0UWG7 |
}} | }} | ||
Revision as of 18:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88990653 |
|---|---|
| End of the center position in the TSS region: | 88990654 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK290978 X63717 AY495076 EU481974 M67454 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54 |
| All_trans: | AK290978:0 X63717:0 AY495076:0 EU481974:0 M67454:0 ENST00000352159.8:2 ENST00000612663.5:-40 ENST00000484444.5:46 BC012479:-55 ENST00000355740.7:-91 KJ958564:-91 KM114217:-91 ENST00000357339.6:93 ENST00000652046.1:113 NR_028036:113 NM_000043:113 NR_028034:113 NR_028033:113 NM_001320619:113 NM_152872:113 NM_152871:113 NR_028035:113 NR_135313:113 ENST00000488877.5:167 ENST00000494410.5:167 ENST00000479522.5:167 X83490:167 X83491:167 X83492:167 X83493:167 DQ894675:189 KJ890693:191 KR709616:191 KR709617:191 KR709618:191 KR709619:191 ENST00000492756.5:192 ENST00000355279.2:192 X89101:192 CR450307:192 FJ200481:192 FJ373045:192 FJ373046:192 FM246457:192 FM246458:192 FM246459:192 Z47993:192 Z47994:192 Z47995:192 Z66556:192 Z70519:192 Z70520:192 ENST00000460510.5:275 ENST00000477270.5:335 |
TATA-Box annotation
| Distance to TSS: | -145 |
|---|---|
| Nearest PromoterID: | NR_028035 |
| Entrez ID: | 355 |
| Nearest Unigene: | Hs.244139 |
| Nearest Refseq: | NM_000043 |
| Nearest Ensembl: | ENSG00000026103 |
| Gene Name: | Fas cell surface death receptor |
| Gene Alias: | ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 |
| Gene Description: | Fas cell surface death receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
