Difference between revisions of "TSS:Hg 106239.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MITOL= | |MITOL= | ||
|RNF153= | |RNF153= | ||
| − | |all_trans=AB191202:53 BC015480:-136 AB529108:141 JF432871:141 KJ894054:141 | + | |all_trans=AB191202:53 BC015480:-136 LF345473:-139 MA581050:-139 AB529108:141 JF432871:141 KJ894054:141 ENST00000358935.3:-172 NM_017824:-172 AK294799:-172 AK309175:-176 AK000452:-176 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=53 | |distance=53 | ||
| − | |distance_to_tss= | + | |distance_to_tss=179 |
|end=92291354 | |end=92291354 | ||
|end_of_center_position=92291347 | |end_of_center_position=92291347 | ||
|entrez_id=54708 | |entrez_id=54708 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=MARCH-V | + | |gene_alias=MARCH-V{{!}}MITOL{{!}}RNF153 |
|gene_description=membrane associated ring-CH-type finger 5 | |gene_description=membrane associated ring-CH-type finger 5 | ||
|gene_id=54708 | |gene_id=54708 | ||
|gene_name=membrane associated ring-CH-type finger 5 | |gene_name=membrane associated ring-CH-type finger 5 | ||
|gene_source=HGNC:26025 | |gene_source=HGNC:26025 | ||
| − | |gene_symbol= | + | |gene_symbol=MARCHF5 |
| − | |gene_synonyms=FLJ20445 MARCH-V | + | |gene_synonyms=FLJ20445 MARCH-V MITOL |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:26025 | |hgnc_mgi_id=HGNC:26025 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_017824 | |nearest_refseq=NM_017824 | ||
|nearest_unigene=Hs.573490 | |nearest_unigene=Hs.573490 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=92291338 | |start=92291338 | ||
Revision as of 18:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92291346 |
|---|---|
| End of the center position in the TSS region: | 92291347 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB191202 |
|---|---|
| Distance: | 53 |
| Num_trans: | 12 |
| All_trans: | AB191202:53 BC015480:-136 LF345473:-139 MA581050:-139 AB529108:141 JF432871:141 KJ894054:141 ENST00000358935.3:-172 NM_017824:-172 AK294799:-172 AK309175:-176 AK000452:-176 |
TATA-Box annotation
| Distance to TSS: | 179 |
|---|---|
| Nearest PromoterID: | NM_017824 |
| Entrez ID: | 54708 |
| Nearest Unigene: | Hs.573490 |
| Nearest Refseq: | NM_017824 |
| Nearest Ensembl: | ENSG00000198060 |
| Gene Name: | membrane associated ring-CH-type finger 5 |
| Gene Alias: | MARCH-V|MITOL|RNF153 |
| Gene Description: | membrane associated ring-CH-type finger 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
