Difference between revisions of "TSS:Hg 106254.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PRH= | |PRH= | ||
|PRHX= | |PRHX= | ||
| − | |all_trans=ENST00000472590.6 | + | |all_trans=ENST00000472590.6:0 ENST00000492654.3:202 Z21533:207 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1869 |
|end=92691830 | |end=92691830 | ||
|end_of_center_position=92691824 | |end_of_center_position=92691824 | ||
|entrez_id=3087 | |entrez_id=3087 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=HEX | + | |gene_alias=HEX{{!}}HMPH{{!}}HOX11L-PEN{{!}}PRH{{!}}PRHX |
|gene_description=hematopoietically expressed homeobox | |gene_description=hematopoietically expressed homeobox | ||
|gene_id=3087 | |gene_id=3087 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_002729 | |nearest_refseq=NM_002729 | ||
|nearest_unigene=Hs.118651 | |nearest_unigene=Hs.118651 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=92691817 | |start=92691817 | ||
|start_of_center_position=92691823 | |start_of_center_position=92691823 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000472590.6 | + | |transcript_name=ENST00000472590.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106254.1 | |tss_id=hg_106254.1 | ||
Revision as of 18:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92691823 |
|---|---|
| End of the center position in the TSS region: | 92691824 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000472590.6 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000472590.6:0 ENST00000492654.3:202 Z21533:207 |
TATA-Box annotation
| Distance to TSS: | 1869 |
|---|---|
| Nearest PromoterID: | NM_002729 |
| Entrez ID: | 3087 |
| Nearest Unigene: | Hs.118651 |
| Nearest Refseq: | NM_002729 |
| Nearest Ensembl: | ENSG00000152804 |
| Gene Name: | hematopoietically expressed homeobox |
| Gene Alias: | HEX|HMPH|HOX11L-PEN|PRH|PRHX |
| Gene Description: | hematopoietically expressed homeobox |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
