Difference between revisions of "TSS:Hg 106257.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SEC15L3= | |SEC15L3= | ||
|Sec15p= | |Sec15p= | ||
| − | |all_trans=NM_001319194:46 AK300285:46 | + | |all_trans=NM_001319194:-12 ENST00000672817.1:46 AK300285:46 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-12 |
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=92831132 | |end=92831132 | ||
|end_of_center_position=92831126 | |end_of_center_position=92831126 | ||
|entrez_id=54536 | |entrez_id=54536 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=EXOC6A | + | |gene_alias=EXOC6A{{!}}SEC15{{!}}SEC15L{{!}}SEC15L1{{!}}SEC15L3{{!}}Sec15p |
|gene_description=exocyst complex component 6 | |gene_description=exocyst complex component 6 | ||
|gene_id=54536 | |gene_id=54536 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_019053 | |nearest_refseq=NM_019053 | ||
|nearest_unigene=Hs.655657 | |nearest_unigene=Hs.655657 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=92831119 | |start=92831119 | ||
|start_of_center_position=92831125 | |start_of_center_position=92831125 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001319194 | + | |transcript_name=NM_001319194 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106257.1 | |tss_id=hg_106257.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8TAG9 |
}} | }} | ||
Revision as of 18:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92831125 |
|---|---|
| End of the center position in the TSS region: | 92831126 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001319194 |
|---|---|
| Distance: | -12 |
| Num_trans: | 3 |
| All_trans: | NM_001319194:-12 ENST00000672817.1:46 AK300285:46 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001319194 |
| Entrez ID: | 54536 |
| Nearest Unigene: | Hs.655657 |
| Nearest Refseq: | NM_019053 |
| Nearest Ensembl: | ENSG00000138190 |
| Gene Name: | exocyst complex component 6 |
| Gene Alias: | EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p |
| Gene Description: | exocyst complex component 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
