Difference between revisions of "TSS:Hg 106506.1"
From referenceTSS
| Line 3: | Line 3: | ||
|DJS= | |DJS= | ||
|MRP2= | |MRP2= | ||
| − | |all_trans= | + | |all_trans=ENST00000648689.1:-19 ENST00000647836.1:-19 ENST00000647814.1:-19 NM_000392:-19 ENST00000648324.1:34 ENST00000649932.1:34 LP747414:-61 MB486554:-61 U49248:75 ENST00000370434.1:92 U66683:92 ENST00000649493.1:132 X96395:137 BC136419:145 U63970:145 |
|cMRP= | |cMRP= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-19 |
| − | |distance_to_tss= | + | |distance_to_tss=25 |
|end=99782671 | |end=99782671 | ||
|end_of_center_position=99782665 | |end_of_center_position=99782665 | ||
|entrez_id=1244 | |entrez_id=1244 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=ABC30 | + | |gene_alias=ABC30{{!}}CMOAT{{!}}DJS{{!}}MRP2{{!}}cMRP |
|gene_description=ATP binding cassette subfamily C member 2 | |gene_description=ATP binding cassette subfamily C member 2 | ||
|gene_id=1244 | |gene_id=1244 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_000392 | |nearest_refseq=NM_000392 | ||
|nearest_unigene=Hs.368243 | |nearest_unigene=Hs.368243 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=99782658 | |start=99782658 | ||
|start_of_center_position=99782664 | |start_of_center_position=99782664 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000648689.1 ENST00000647836.1 ENST00000647814.1 NM_000392 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106506.1 | |tss_id=hg_106506.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q92887 | + | |uniprot_id=A0A3B3IRZ2 Q92887 |
}} | }} | ||
Revision as of 18:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99782664 |
|---|---|
| End of the center position in the TSS region: | 99782665 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000648689.1 ENST00000647836.1 ENST00000647814.1 NM_000392 |
|---|---|
| Distance: | -19 |
| Num_trans: | 15 |
| All_trans: | ENST00000648689.1:-19 ENST00000647836.1:-19 ENST00000647814.1:-19 NM_000392:-19 ENST00000648324.1:34 ENST00000649932.1:34 LP747414:-61 MB486554:-61 U49248:75 ENST00000370434.1:92 U66683:92 ENST00000649493.1:132 X96395:137 BC136419:145 U63970:145 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_000392 |
| Entrez ID: | 1244 |
| Nearest Unigene: | Hs.368243 |
| Nearest Refseq: | NM_000392 |
| Nearest Ensembl: | ENSG00000023839 |
| Gene Name: | ATP binding cassette subfamily C member 2 |
| Gene Alias: | ABC30|CMOAT|DJS|MRP2|cMRP |
| Gene Description: | ATP binding cassette subfamily C member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
