Difference between revisions of "TSS:Hg 106532.1"
From referenceTSS
| Line 3: | Line 3: | ||
|SCD1= | |SCD1= | ||
|SCDOS= | |SCDOS= | ||
| − | |all_trans=S70284:0 AF116616:0 | + | |all_trans=S70284:0 AF116616:0 LF345711:32 MA581288:32 LF345712:140 MA581289:140 LF345756:371 MA581333:371 LF345713:372 MA581290:372 LF345709:-380 MA581286:-380 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=847 |
|end=100348108 | |end=100348108 | ||
|end_of_center_position=100348080 | |end_of_center_position=100348080 | ||
|entrez_id=6319 | |entrez_id=6319 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=FADS5 | + | |gene_alias=FADS5{{!}}MSTP008{{!}}SCD1{{!}}SCDOS{{!}}hSCD1 |
|gene_description=stearoyl-CoA desaturase | |gene_description=stearoyl-CoA desaturase | ||
|gene_id=6319 | |gene_id=6319 | ||
| − | |gene_name=stearoyl-CoA desaturase | + | |gene_name=stearoyl-CoA desaturase |
|gene_source=HGNC:10571 | |gene_source=HGNC:10571 | ||
|gene_symbol=SCD | |gene_symbol=SCD | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_005063 | |nearest_refseq=NM_005063 | ||
|nearest_unigene=Hs.558396 | |nearest_unigene=Hs.558396 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=100348051 | |start=100348051 | ||
Revision as of 18:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100348079 |
|---|---|
| End of the center position in the TSS region: | 100348080 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | S70284 AF116616 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | S70284:0 AF116616:0 LF345711:32 MA581288:32 LF345712:140 MA581289:140 LF345756:371 MA581333:371 LF345713:372 MA581290:372 LF345709:-380 MA581286:-380 |
TATA-Box annotation
| Distance to TSS: | 847 |
|---|---|
| Nearest PromoterID: | NM_005063 |
| Entrez ID: | 6319 |
| Nearest Unigene: | Hs.558396 |
| Nearest Refseq: | NM_005063 |
| Nearest Ensembl: | ENSG00000099194 |
| Gene Name: | stearoyl-CoA desaturase |
| Gene Alias: | FADS5|MSTP008|SCD1|SCDOS|hSCD1 |
| Gene Description: | stearoyl-CoA desaturase |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
