Difference between revisions of "TSS:Hg 109499.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MRT37= | |MRT37= | ||
| − | |all_trans=ENST00000373815.5 | + | |all_trans=ENST00000373815.5:-15 ENST00000618080.4:280 ENST00000506635.5:-371 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 10: | Line 10: | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=ANKYRIN-G | + | |gene_alias=ANKYRIN-G{{!}}MRT37 |
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
|gene_id=288 | |gene_id=288 | ||
| − | |gene_name= | + | |gene_name=ankyrin 3 |
|gene_source=HGNC:494 | |gene_source=HGNC:494 | ||
|gene_symbol=ANK3 | |gene_symbol=ANK3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001149 | |nearest_refseq=NM_001149 | ||
|nearest_unigene=Hs.499725 | |nearest_unigene=Hs.499725 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=60139366 | |start=60139366 | ||
|start_of_center_position=60139375 | |start_of_center_position=60139375 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000373815.5 | + | |transcript_name=ENST00000373815.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_109499.1 | |tss_id=hg_109499.1 | ||
Revision as of 19:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60139375 |
|---|---|
| End of the center position in the TSS region: | 60139376 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373815.5 |
|---|---|
| Distance: | -15 |
| Num_trans: | 3 |
| All_trans: | ENST00000373815.5:-15 ENST00000618080.4:280 ENST00000506635.5:-371 |
TATA-Box annotation
| Distance to TSS: | 1640 |
|---|---|
| Nearest PromoterID: | NM_001149 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | ANKYRIN-G|MRT37 |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
