Difference between revisions of "TSS:Hg 110121.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NST2= | |NST2= | ||
| − | |all_trans= | + | |all_trans=AK303648:2 NR_160743:13 NR_160744:13 NR_160745:13 ENST00000398701.2:35 BC018681:50 ENST00000603027.5:182 BC052780:182 ENST00000309979.11:235 NM_003635:235 NM_001330107:235 BC035711:249 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-14 |
|end=73811835 | |end=73811835 | ||
|end_of_center_position=73811834 | |end_of_center_position=73811834 | ||
|entrez_id=8509 | |entrez_id=8509 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=HSST2 | + | |gene_alias=HSST2{{!}}N-HSST 2{{!}}NST2 |
|gene_description=N-deacetylase and N-sulfotransferase 2 | |gene_description=N-deacetylase and N-sulfotransferase 2 | ||
|gene_id=8509 | |gene_id=8509 | ||
| − | |gene_name=N-deacetylase | + | |gene_name=N-deacetylase and N-sulfotransferase 2 |
|gene_source=HGNC:7681 | |gene_source=HGNC:7681 | ||
|gene_symbol=NDST2 | |gene_symbol=NDST2 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:7681 | |hgnc_mgi_id=HGNC:7681 | ||
|nearest_ensembl=ENSG00000166507 | |nearest_ensembl=ENSG00000166507 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_160743 |
|nearest_refseq=NM_003635 | |nearest_refseq=NM_003635 | ||
|nearest_unigene=Hs.654758 | |nearest_unigene=Hs.654758 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=73811832 | |start=73811832 | ||
|start_of_center_position=73811833 | |start_of_center_position=73811833 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK303648 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_110121.1 | |tss_id=hg_110121.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4E139 | + | |uniprot_id=B4E139 |
}} | }} | ||
Revision as of 20:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73811833 |
|---|---|
| End of the center position in the TSS region: | 73811834 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK303648 |
|---|---|
| Distance: | 2 |
| Num_trans: | 12 |
| All_trans: | AK303648:2 NR_160743:13 NR_160744:13 NR_160745:13 ENST00000398701.2:35 BC018681:50 ENST00000603027.5:182 BC052780:182 ENST00000309979.11:235 NM_003635:235 NM_001330107:235 BC035711:249 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NR_160743 |
| Entrez ID: | 8509 |
| Nearest Unigene: | Hs.654758 |
| Nearest Refseq: | NM_003635 |
| Nearest Ensembl: | ENSG00000166507 |
| Gene Name: | N-deacetylase and N-sulfotransferase 2 |
| Gene Alias: | HSST2|N-HSST 2|NST2 |
| Gene Description: | N-deacetylase and N-sulfotransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
