Difference between revisions of "TSS:Hg 111741.1"
From referenceTSS
| Line 11: | Line 11: | ||
|TK14= | |TK14= | ||
|TK25= | |TK25= | ||
| − | |all_trans=ENST00000613048.4:7 ENST00000356226.8 | + | |all_trans=ENST00000613048.4:7 ENST00000356226.8:7 NM_022970:7 BC039243:7 ENST00000369059.5:13 ENST00000358487.10:21 NM_000141:21 NM_001144917:21 NR_073009:21 NM_001144918:21 NM_001320658:21 NM_001144919:21 ENST00000360144.7:33 AK026508:33 ENST00000604236.5:52 BC096749:55 ENST00000457416.6:62 M97193:62 M35718:67 ENST00000336553.10:69 ENST00000369060.8:167 ENST00000359354.6:167 M87771:167 ENST00000369058.7:231 AB030073:231 M80634:231 AB030075:231 AB030074:231 AB030076:231 AB030077:231 AB030078:231 M87772:379 M87770:381 ENST00000490349.5:393 U11814:393 X52832:475 ENST00000636922.1:499 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| Line 20: | Line 20: | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=BBDS | + | |gene_alias=BBDS{{!}}BEK{{!}}BFR-1{{!}}CD332{{!}}CEK3{{!}}CFD1{{!}}ECT1{{!}}JWS{{!}}K-SAM{{!}}KGFR{{!}}TK14{{!}}TK25 |
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
|gene_id=2263 | |gene_id=2263 | ||
| Line 30: | Line 30: | ||
|hgnc_mgi_id=HGNC:3689 | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000141 |
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| − | |num_trans= | + | |num_trans=37 |
|species=human | |species=human | ||
|start=121598464 | |start=121598464 | ||
|start_of_center_position=121598467 | |start_of_center_position=121598467 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000613048.4 ENST00000356226.8 | + | |transcript_name=ENST00000613048.4 ENST00000356226.8 NM_022970 BC039243 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111741.1 | |tss_id=hg_111741.1 | ||
Revision as of 20:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121598467 |
|---|---|
| End of the center position in the TSS region: | 121598468 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000613048.4 ENST00000356226.8 NM_022970 BC039243 |
|---|---|
| Distance: | 7 |
| Num_trans: | 37 |
| All_trans: | ENST00000613048.4:7 ENST00000356226.8:7 NM_022970:7 BC039243:7 ENST00000369059.5:13 ENST00000358487.10:21 NM_000141:21 NM_001144917:21 NR_073009:21 NM_001144918:21 NM_001320658:21 NM_001144919:21 ENST00000360144.7:33 AK026508:33 ENST00000604236.5:52 BC096749:55 ENST00000457416.6:62 M97193:62 M35718:67 ENST00000336553.10:69 ENST00000369060.8:167 ENST00000359354.6:167 M87771:167 ENST00000369058.7:231 AB030073:231 M80634:231 AB030075:231 AB030074:231 AB030076:231 AB030077:231 AB030078:231 M87772:379 M87770:381 ENST00000490349.5:393 U11814:393 X52832:475 ENST00000636922.1:499 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_000141 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
