Difference between revisions of "TSS:Hg 113067.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000529979. | + | |all_trans=ENST00000529979.6:-25 BC028123:-50 ENST00000529829.6:-59 ENST00000671658.1:-61 ENST00000663840.1:-64 NR_046374:-86 NR_046375:-86 NR_034093:-86 NR_034094:-86 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 12: | Line 12: | ||
|gene_description=MRVI1 antisense RNA 1 | |gene_description=MRVI1 antisense RNA 1 | ||
|gene_id=100129827 | |gene_id=100129827 | ||
| − | |gene_name= | + | |gene_name=IRAG1 antisense RNA 1 |
|gene_source=HGNC:43434 | |gene_source=HGNC:43434 | ||
| − | |gene_symbol= | + | |gene_symbol=IRAG1-AS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:43434 | |hgnc_mgi_id=HGNC:43434 | ||
|nearest_ensembl=ENSG00000177112 | |nearest_ensembl=ENSG00000177112 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_046375 |
|nearest_refseq=NR_034093 | |nearest_refseq=NR_034093 | ||
|nearest_unigene=Hs.246769 | |nearest_unigene=Hs.246769 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=10541335 | |start_of_center_position=10541335 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000529979. | + | |transcript_name=ENST00000529979.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_113067.1 | |tss_id=hg_113067.1 | ||
Revision as of 21:11, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 10541335 |
|---|---|
| End of the center position in the TSS region: | 10541336 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000529979.6 |
|---|---|
| Distance: | -25 |
| Num_trans: | 9 |
| All_trans: | ENST00000529979.6:-25 BC028123:-50 ENST00000529829.6:-59 ENST00000671658.1:-61 ENST00000663840.1:-64 NR_046374:-86 NR_046375:-86 NR_034093:-86 NR_034094:-86 |
TATA-Box annotation
| Distance to TSS: | 99 |
|---|---|
| Nearest PromoterID: | NR_046375 |
| Entrez ID: | 100129827 |
| Nearest Unigene: | Hs.246769 |
| Nearest Refseq: | NR_034093 |
| Nearest Ensembl: | ENSG00000177112 |
| Gene Name: | IRAG1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | MRVI1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.095 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
