Difference between revisions of "TSS:Hg 132830.1"
From referenceTSS
| Line 13: | Line 13: | ||
|entrez_id=7112 | |entrez_id=7112 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CMD1T | + | |gene_alias=CMD1T{{!}}LAP2{{!}}LEMD4{{!}}PRO0868{{!}}TP |
|gene_description=thymopoietin | |gene_description=thymopoietin | ||
|gene_id=100128191 | |gene_id=100128191 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:44158 | |hgnc_mgi_id=HGNC:44158 | ||
|nearest_ensembl=ENSG00000120802 | |nearest_ensembl=ENSG00000120802 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_003276 |
|nearest_refseq=NM_003276 | |nearest_refseq=NM_003276 | ||
|nearest_unigene=Hs.11355 | |nearest_unigene=Hs.11355 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=98515433 | |start_of_center_position=98515433 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(CAGTTTAAAAGG,-,0.00) |
|transcript_name=BC037346 | |transcript_name=BC037346 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 04:51, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 98515433 |
|---|---|
| End of the center position in the TSS region: | 98515434 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC037346 |
|---|---|
| Distance: | -33 |
| Num_trans: | 1 |
| All_trans: | BC037346:-33 |
TATA-Box annotation
| Distance to TSS: | -140 |
|---|---|
| Nearest PromoterID: | NM_003276 |
| Entrez ID: | 7112 |
| Nearest Unigene: | Hs.11355 |
| Nearest Refseq: | NM_003276 |
| Nearest Ensembl: | ENSG00000120802 |
| Gene Name: | TMPO antisense RNA 1 |
| Gene Alias: | CMD1T|LAP2|LEMD4|PRO0868|TP |
| Gene Description: | thymopoietin |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CAGTTTAAAAGG,-,0.00) |
