Difference between revisions of "TSS:Hg 13306.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000413606.5:0 | + | |all_trans=ENST00000413606.5:0 ENST00000668257.1:0 ENST00000661111.1:0 ENST00000659026.1:0 ENST00000657560.1:0 ENST00000421202.6:0 ENST00000670231.1:0 ENST00000411670.5:0 ENST00000452347.6:0 ENST00000653362.1:0 ENST00000655606.1:0 ENST00000445076.2:0 ENST00000457387.2:0 ENST00000438777.5:0 ENST00000449305.5:0 NR_034089:0 AL832786:0 ENST00000669506.1:-6 Z36846:7 ENST00000451302.6:-172 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_034089 | |nearest_refseq=NR_034089 | ||
|nearest_unigene=Hs.732666 | |nearest_unigene=Hs.732666 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=93345782 | |start=93345782 | ||
|start_of_center_position=93345817 | |start_of_center_position=93345817 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000413606.5 | + | |transcript_name=ENST00000413606.5 ENST00000668257.1 ENST00000661111.1 ENST00000659026.1 ENST00000657560.1 ENST00000421202.6 ENST00000670231.1 ENST00000411670.5 ENST00000452347.6 ENST00000653362.1 ENST00000655606.1 ENST00000445076.2 ENST00000457387.2 ENST00000438777.5 ENST00000449305.5 NR_034089 AL832786 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_13306.1 | |tss_id=hg_13306.1 | ||
Revision as of 04:56, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93345817 |
|---|---|
| End of the center position in the TSS region: | 93345818 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000413606.5 ENST00000668257.1 ENST00000661111.1 ENST00000659026.1 ENST00000657560.1 ENST00000421202.6 ENST00000670231.1 ENST00000411670.5 ENST00000452347.6 ENST00000653362.1 ENST00000655606.1 ENST00000445076.2 ENST00000457387.2 ENST00000438777.5 ENST00000449305.5 NR_034089 AL832786 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000413606.5:0 ENST00000668257.1:0 ENST00000661111.1:0 ENST00000659026.1:0 ENST00000657560.1:0 ENST00000421202.6:0 ENST00000670231.1:0 ENST00000411670.5:0 ENST00000452347.6:0 ENST00000653362.1:0 ENST00000655606.1:0 ENST00000445076.2:0 ENST00000457387.2:0 ENST00000438777.5:0 ENST00000449305.5:0 NR_034089:0 AL832786:0 ENST00000669506.1:-6 Z36846:7 ENST00000451302.6:-172 |
TATA-Box annotation
| Distance to TSS: | -7 |
|---|---|
| Nearest PromoterID: | NR_034089 |
| Entrez ID: | 100131564 |
| Nearest Unigene: | Hs.732666 |
| Nearest Refseq: | NR_034089 |
| Nearest Ensembl: | |
| Gene Name: | CCDC18 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | CCDC18 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
