Difference between revisions of "TSS:Hg 142313.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ACN= | |ACN= | ||
| − | |all_trans=BC153822:0 | + | |all_trans=ENST00000644147.1:0 BC153822:0 ENST00000637218.2:-19 NM_001354640:-19 ENST00000644000.1:36 ENST00000642668.1:111 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=26 |
|end=23104970 | |end=23104970 | ||
|end_of_center_position=23104963 | |end_of_center_position=23104963 | ||
| − | |entrez_id= | + | |entrez_id=100128908 |
|fSAP152= | |fSAP152= | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=leishmanolysin like peptidase 2 |
|gene_id=100128908 | |gene_id=100128908 | ||
| − | |gene_name=leishmanolysin | + | |gene_name=leishmanolysin like peptidase 2 |
| − | |gene_source= | + | |gene_source=HGNC:53647 |
| − | |gene_symbol= | + | |gene_symbol=LMLN2 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:53647 |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000283654 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001354640 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001354640 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.578287 |
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=23104955 | |start=23104955 | ||
|start_of_center_position=23104962 | |start_of_center_position=23104962 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC153822 | + | |transcript_name=ENST00000644147.1 BC153822 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_142313.1 | |tss_id=hg_142313.1 | ||
Revision as of 08:31, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23104962 |
|---|---|
| End of the center position in the TSS region: | 23104963 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000644147.1 BC153822 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000644147.1:0 BC153822:0 ENST00000637218.2:-19 NM_001354640:-19 ENST00000644000.1:36 ENST00000642668.1:111 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001354640 |
| Entrez ID: | 100128908 |
| Nearest Unigene: | Hs.578287 |
| Nearest Refseq: | NM_001354640 |
| Nearest Ensembl: | ENSG00000283654 |
| Gene Name: | leishmanolysin like peptidase 2 |
| Gene Alias: | - |
| Gene Description: | leishmanolysin like peptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
