Difference between revisions of "TSS:Hg 154905.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000662383.1:215 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=215 |
| − | |distance_to_tss= | + | |distance_to_tss=5792 |
|end=70760893 | |end=70760893 | ||
|end_of_center_position=70760887 | |end_of_center_position=70760887 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=VAC14 antisense RNA 1 | |gene_description=VAC14 antisense RNA 1 | ||
| − | |gene_name=VAC14-AS1 | + | |gene_id=100130894 |
| + | |gene_name=VAC14 antisense RNA 1 | ||
| + | |gene_source=HGNC:48605 | ||
| + | |gene_symbol=VAC14-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:48605 | ||
|nearest_ensembl=ENSG00000214353 | |nearest_ensembl=ENSG00000214353 | ||
|nearest_promoter_id=NR_034083 | |nearest_promoter_id=NR_034083 | ||
|nearest_refseq=NR_034083 | |nearest_refseq=NR_034083 | ||
|nearest_unigene=Hs.678899 | |nearest_unigene=Hs.678899 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=70760880 | |start=70760880 | ||
|start_of_center_position=70760886 | |start_of_center_position=70760886 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000662383.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_154905.1 | |tss_id=hg_154905.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 13:21, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70760886 |
|---|---|
| End of the center position in the TSS region: | 70760887 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000662383.1 |
|---|---|
| Distance: | 215 |
| Num_trans: | 1 |
| All_trans: | ENST00000662383.1:215 |
TATA-Box annotation
| Distance to TSS: | 5792 |
|---|---|
| Nearest PromoterID: | NR_034083 |
| Entrez ID: | 100130894 |
| Nearest Unigene: | Hs.678899 |
| Nearest Refseq: | NR_034083 |
| Nearest Ensembl: | ENSG00000214353 |
| Gene Name: | VAC14 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | VAC14 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
