Difference between revisions of "TSS:Hg 159025.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000575601.5:0 | + | |all_trans=ENST00000663434.1:0 ENST00000575601.5:0 ENST00000667038.1:0 ENST00000649359.1:0 ENST00000571689.1:0 AK021878:0 BC029580:0 ENST00000671211.1:-15 ENST00000669386.1:-30 NR_034082:-50 NR_152840:-50 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=83 |
|end=5192124 | |end=5192124 | ||
|end_of_center_position=5192091 | |end_of_center_position=5192091 | ||
| Line 12: | Line 12: | ||
|gene_description=uncharacterized LOC100130950 | |gene_description=uncharacterized LOC100130950 | ||
|gene_id=100130950 | |gene_id=100130950 | ||
| − | |gene_name= | + | |gene_name=ZNF594 divergent transcript |
| − | |gene_source= | + | |gene_source=HGNC:55347 |
| − | |gene_symbol= | + | |gene_symbol=ZNF594-DT |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:55347 |
| − | |nearest_ensembl= | + | |nearest_ensembl= |
|nearest_promoter_id=NR_034082 | |nearest_promoter_id=NR_034082 | ||
|nearest_refseq=NR_034082 | |nearest_refseq=NR_034082 | ||
|nearest_unigene=Hs.668646 | |nearest_unigene=Hs.668646 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=5192056 | |start=5192056 | ||
|start_of_center_position=5192090 | |start_of_center_position=5192090 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000575601.5 | + | |transcript_name=ENST00000663434.1 ENST00000575601.5 ENST00000667038.1 ENST00000649359.1 ENST00000571689.1 AK021878 BC029580 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_159025.1 | |tss_id=hg_159025.1 | ||
Revision as of 14:56, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5192090 |
|---|---|
| End of the center position in the TSS region: | 5192091 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000663434.1 ENST00000575601.5 ENST00000667038.1 ENST00000649359.1 ENST00000571689.1 AK021878 BC029580 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000663434.1:0 ENST00000575601.5:0 ENST00000667038.1:0 ENST00000649359.1:0 ENST00000571689.1:0 AK021878:0 BC029580:0 ENST00000671211.1:-15 ENST00000669386.1:-30 NR_034082:-50 NR_152840:-50 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NR_034082 |
| Entrez ID: | 100130950 |
| Nearest Unigene: | Hs.668646 |
| Nearest Refseq: | NR_034082 |
| Nearest Ensembl: | |
| Gene Name: | ZNF594 divergent transcript |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130950 |
| Gene Type: | ncRNA |
| CpG%: | 0.115 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
