Difference between revisions of "TSS:Hg 172493.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000585258.1:0 NR_040024 | + | |all_trans=ENST00000585258.1:0 NR_040024:0 BC032908:0 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=ZNF236 divergent transcript |
|gene_id=100131655 | |gene_id=100131655 | ||
| − | |gene_name= | + | |gene_name=ZNF236 divergent transcript |
| − | |gene_source= | + | |gene_source=HGNC:53779 |
| − | |gene_symbol= | + | |gene_symbol=ZNF236-DT |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:53779 |
|nearest_ensembl=ENSG00000264278 | |nearest_ensembl=ENSG00000264278 | ||
|nearest_promoter_id=NR_040024 | |nearest_promoter_id=NR_040024 | ||
|nearest_refseq=NR_040024 | |nearest_refseq=NR_040024 | ||
|nearest_unigene=Hs.385806 | |nearest_unigene=Hs.385806 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=76822276 | |start=76822276 | ||
|start_of_center_position=76822293 | |start_of_center_position=76822293 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000585258.1 NR_040024 | + | |transcript_name=ENST00000585258.1 NR_040024 BC032908 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_172493.1 | |tss_id=hg_172493.1 | ||
Revision as of 20:06, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 76822293 |
|---|---|
| End of the center position in the TSS region: | 76822294 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000585258.1 NR_040024 BC032908 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000585258.1:0 NR_040024:0 BC032908:0 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NR_040024 |
| Entrez ID: | 100131655 |
| Nearest Unigene: | Hs.385806 |
| Nearest Refseq: | NR_040024 |
| Nearest Ensembl: | ENSG00000264278 |
| Gene Name: | ZNF236 divergent transcript |
| Gene Alias: | - |
| Gene Description: | ZNF236 divergent transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.165 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
