Difference between revisions of "TSS:Hg 177867.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000600726.5:16 NR_027334 | + | |all_trans=ENST00000661912.1:0 ENST00000600726.5:16 NR_027334:16 ENST00000593642.5:-20 ENST00000653470.1:39 ENST00000600534.1:55 BC024736:55 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
|end=58559170 | |end=58559170 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_027334 | |nearest_refseq=NR_027334 | ||
|nearest_unigene=Hs.743767 | |nearest_unigene=Hs.743767 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=58559148 | |start=58559148 | ||
|start_of_center_position=58559159 | |start_of_center_position=58559159 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000661912.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_177867.1 | |tss_id=hg_177867.1 | ||
Revision as of 22:10, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58559159 |
|---|---|
| End of the center position in the TSS region: | 58559160 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000661912.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000661912.1:0 ENST00000600726.5:16 NR_027334:16 ENST00000593642.5:-20 ENST00000653470.1:39 ENST00000600534.1:55 BC024736:55 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NR_027334 |
| Entrez ID: | 100131691 |
| Nearest Unigene: | Hs.743767 |
| Nearest Refseq: | NR_027334 |
| Nearest Ensembl: | ENSG00000267858 |
| Gene Name: | MZF1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | MZF1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.11 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
