Difference between revisions of "TSS:Hg 219747.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000379239.8:4 NM_001282530 | + | |all_trans=ENST00000379239.8:4 NM_001282530:4 NR_102370:-7 ENST00000458838.1:-8 BC041077:9 ENST00000474372.1:14 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018449 | |nearest_refseq=NM_018449 | ||
|nearest_unigene=Hs.493739 | |nearest_unigene=Hs.493739 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=33934367 | |start=33934367 | ||
|start_of_center_position=33934367 | |start_of_center_position=33934367 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-72(TCCTTTAGAGAC,+,0.00) |
| − | |transcript_name=ENST00000379239.8 NM_001282530 | + | |transcript_name=ENST00000379239.8 NM_001282530 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219747.1 | |tss_id=hg_219747.1 | ||
Revision as of 08:17, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33934367 |
|---|---|
| End of the center position in the TSS region: | 33934368 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379239.8 NM_001282530 |
|---|---|
| Distance: | 4 |
| Num_trans: | 6 |
| All_trans: | ENST00000379239.8:4 NM_001282530:4 NR_102370:-7 ENST00000458838.1:-8 BC041077:9 ENST00000474372.1:14 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001282530 |
| Entrez ID: | 55833 |
| Nearest Unigene: | Hs.493739 |
| Nearest Refseq: | NM_018449 |
| Nearest Ensembl: | ENSG00000137073 |
| Gene Name: | ubiquitin associated protein 2 |
| Gene Alias: | UBAP-2 |
| Gene Description: | ubiquitin associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -72(TCCTTTAGAGAC,+,0.00) |
