Difference between revisions of "TSS:Hg 219786.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HOMG1= | |HOMG1= | ||
|HSH= | |HSH= | ||
| − | |all_trans=ENST00000361255.7:133 NM_001177311 | + | |all_trans=ENST00000361255.7:133 NM_001177311:133 AY333284:133 ENST00000449912.6:-240 NM_001177310:-240 AY333283:-240 AF448232:-376 BC156137:-376 AY333282:-439 AY333285:-439 AY333286:-439 AY333287:-439 AY333288:-439 ENST00000360774.6:-441 NM_017662:-441 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 13: | Line 13: | ||
|entrez_id=140803 | |entrez_id=140803 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=CHAK2 | + | |gene_alias=CHAK2{{!}}HMGX{{!}}HOMG{{!}}HOMG1{{!}}HSH |
|gene_description=transient receptor potential cation channel subfamily M member 6 | |gene_description=transient receptor potential cation channel subfamily M member 6 | ||
|gene_id=140803 | |gene_id=140803 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=74887479 | |start_of_center_position=74887479 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000361255.7 NM_001177311 | + | |transcript_name=ENST00000361255.7 NM_001177311 AY333284 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219786.1 | |tss_id=hg_219786.1 | ||
Revision as of 08:17, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 74887479 |
|---|---|
| End of the center position in the TSS region: | 74887480 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000361255.7 NM_001177311 AY333284 |
|---|---|
| Distance: | 133 |
| Num_trans: | 15 |
| All_trans: | ENST00000361255.7:133 NM_001177311:133 AY333284:133 ENST00000449912.6:-240 NM_001177310:-240 AY333283:-240 AF448232:-376 BC156137:-376 AY333282:-439 AY333285:-439 AY333286:-439 AY333287:-439 AY333288:-439 ENST00000360774.6:-441 NM_017662:-441 |
TATA-Box annotation
| Distance to TSS: | -133 |
|---|---|
| Nearest PromoterID: | NM_001177311 |
| Entrez ID: | 140803 |
| Nearest Unigene: | Hs.272225 |
| Nearest Refseq: | NM_017662 |
| Nearest Ensembl: | ENSG00000119121 |
| Gene Name: | transient receptor potential cation channel subfamily M member 6 |
| Gene Alias: | CHAK2|HMGX|HOMG|HOMG1|HSH |
| Gene Description: | transient receptor potential cation channel subfamily M member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
