Difference between revisions of "TSS:Hg 219801.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000298743. | + | |all_trans=L13698:90 ENST00000298743.9:-227 NM_002048:-227 LF214003:-227 MA449580:-227 LF209815:-398 MA445392:-398 BC132682:415 BC136586:415 BC074809:458 BC074908:458 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
|distance=90 | |distance=90 | ||
| − | |distance_to_tss= | + | |distance_to_tss=227 |
|end=86947279 | |end=86947279 | ||
|end_of_center_position=86947279 | |end_of_center_position=86947279 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=86947278 | |start=86947278 | ||
|start_of_center_position=86947278 | |start_of_center_position=86947278 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=L13698 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219801.1 | |tss_id=hg_219801.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 08:17, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 86947278 |
|---|---|
| End of the center position in the TSS region: | 86947279 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | L13698 |
|---|---|
| Distance: | 90 |
| Num_trans: | 11 |
| All_trans: | L13698:90 ENST00000298743.9:-227 NM_002048:-227 LF214003:-227 MA449580:-227 LF209815:-398 MA445392:-398 BC132682:415 BC136586:415 BC074809:458 BC074908:458 |
TATA-Box annotation
| Distance to TSS: | 227 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | growth arrest specific 1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
