Difference between revisions of "TSS:Hg 219953.1"
From referenceTSS
| Line 4: | Line 4: | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=-48 | |distance=-48 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1638 |
|end=136372031 | |end=136372031 | ||
|end_of_center_position=136372031 | |end_of_center_position=136372031 | ||
|entrez_id=64170 | |entrez_id=64170 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CANDF2 | + | |gene_alias=CANDF2{{!}}hCARD9 |
|gene_description=caspase recruitment domain family member 9 | |gene_description=caspase recruitment domain family member 9 | ||
|gene_id=64170 | |gene_id=64170 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:16391 | |hgnc_mgi_id=HGNC:16391 | ||
|nearest_ensembl=ENSG00000187796 | |nearest_ensembl=ENSG00000187796 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_052814 |
|nearest_refseq=NM_052813 | |nearest_refseq=NM_052813 | ||
|nearest_unigene=Hs.694071 | |nearest_unigene=Hs.694071 | ||
Revision as of 08:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136372030 |
|---|---|
| End of the center position in the TSS region: | 136372031 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ894539 KJ903060 CU679165 |
|---|---|
| Distance: | -48 |
| Num_trans: | 6 |
| All_trans: | KJ894539:-48 KJ903060:-48 CU679165:-48 DQ893526:-49 EU176781:-49 AB527615:-50 |
TATA-Box annotation
| Distance to TSS: | 1638 |
|---|---|
| Nearest PromoterID: | NM_052814 |
| Entrez ID: | 64170 |
| Nearest Unigene: | Hs.694071 |
| Nearest Refseq: | NM_052813 |
| Nearest Ensembl: | ENSG00000187796 |
| Gene Name: | caspase recruitment domain family member 9 |
| Gene Alias: | CANDF2|hCARD9 |
| Gene Description: | caspase recruitment domain family member 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
