Difference between revisions of "TSS:Hg 224216.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CaM-K1= | |CaM-K1= | ||
|CaMKID= | |CaMKID= | ||
| − | |all_trans=ENST00000487696 | + | |all_trans=ENST00000487696.1:22 AB081726:-39 KY966262:42 ENST00000619168.5:-79 NM_020397:-79 NM_153498:-79 AK289393:-84 BC035745:96 ENST00000378845.5:103 AF286366:103 CU690184:186 AB528894:186 KJ899309:186 KJ905511:186 DQ892464:187 DQ895676:187 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=22 | |distance=22 | ||
| − | |distance_to_tss= | + | |distance_to_tss=81 |
|end=12349630 | |end=12349630 | ||
|end_of_center_position=12349628 | |end_of_center_position=12349628 | ||
|entrez_id=57118 | |entrez_id=57118 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=CKLiK | + | |gene_alias=CKLiK{{!}}CaM-K1{{!}}CaMKID |
|gene_description=calcium/calmodulin dependent protein kinase ID | |gene_description=calcium/calmodulin dependent protein kinase ID | ||
|gene_id=57118 | |gene_id=57118 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020397 | |nearest_refseq=NM_020397 | ||
|nearest_unigene=Hs.600547 | |nearest_unigene=Hs.600547 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=12349625 | |start=12349625 | ||
|start_of_center_position=12349627 | |start_of_center_position=12349627 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000487696 | + | |transcript_name=ENST00000487696.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224216.1 | |tss_id=hg_224216.1 | ||
Revision as of 09:15, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 12349627 |
|---|---|
| End of the center position in the TSS region: | 12349628 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000487696.1 |
|---|---|
| Distance: | 22 |
| Num_trans: | 16 |
| All_trans: | ENST00000487696.1:22 AB081726:-39 KY966262:42 ENST00000619168.5:-79 NM_020397:-79 NM_153498:-79 AK289393:-84 BC035745:96 ENST00000378845.5:103 AF286366:103 CU690184:186 AB528894:186 KJ899309:186 KJ905511:186 DQ892464:187 DQ895676:187 |
TATA-Box annotation
| Distance to TSS: | 81 |
|---|---|
| Nearest PromoterID: | NM_153498 |
| Entrez ID: | 57118 |
| Nearest Unigene: | Hs.600547 |
| Nearest Refseq: | NM_020397 |
| Nearest Ensembl: | ENSG00000183049 |
| Gene Name: | calcium/calmodulin dependent protein kinase ID |
| Gene Alias: | CKLiK|CaM-K1|CaMKID |
| Gene Description: | calcium/calmodulin dependent protein kinase ID |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
