Difference between revisions of "TSS:Hg 231442.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MIP3B= | |MIP3B= | ||
|SCYA19= | |SCYA19= | ||
| − | |all_trans=ENST00000485502 | + | |all_trans=ENST00000485502.1:-229 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-229 | |distance=-229 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1278 |
|end=34690009 | |end=34690009 | ||
|end_of_center_position=34689999 | |end_of_center_position=34689999 | ||
|entrez_id=6363 | |entrez_id=6363 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=CKb11 | + | |gene_alias=CKb11{{!}}ELC{{!}}MIP-3b{{!}}MIP3B{{!}}SCYA19 |
|gene_description=C-C motif chemokine ligand 19 | |gene_description=C-C motif chemokine ligand 19 | ||
|gene_id=6363 | |gene_id=6363 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_006274 | |nearest_refseq=NM_006274 | ||
|nearest_unigene=Hs.50002 | |nearest_unigene=Hs.50002 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=34689987 | |start=34689987 | ||
|start_of_center_position=34689998 | |start_of_center_position=34689998 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000485502 | + | |transcript_name=ENST00000485502.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_231442.1 | |tss_id=hg_231442.1 | ||
Revision as of 12:01, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34689998 |
|---|---|
| End of the center position in the TSS region: | 34689999 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000485502.1 |
|---|---|
| Distance: | -229 |
| Num_trans: | 1 |
| All_trans: | ENST00000485502.1:-229 |
TATA-Box annotation
| Distance to TSS: | 1278 |
|---|---|
| Nearest PromoterID: | NM_006274 |
| Entrez ID: | 6363 |
| Nearest Unigene: | Hs.50002 |
| Nearest Refseq: | NM_006274 |
| Nearest Ensembl: | ENSG00000172724 |
| Gene Name: | C-C motif chemokine ligand 19 |
| Gene Alias: | CKb11|ELC|MIP-3b|MIP3B|SCYA19 |
| Gene Description: | C-C motif chemokine ligand 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
