Difference between revisions of "TSS:Hg 231546.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000289032.12 | + | |all_trans=ENST00000289032.12:8 AK302460:8 ENST00000498811.2:-33 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038890 | |nearest_refseq=NR_038890 | ||
|nearest_unigene=Hs.710921 | |nearest_unigene=Hs.710921 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=96875581 | |start=96875581 | ||
|start_of_center_position=96875585 | |start_of_center_position=96875585 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=10(CCGTTTATAAAC,-,0.00) |
| − | |transcript_name=ENST00000289032.12 | + | |transcript_name=ENST00000289032.12 AK302460 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_231546.1 | |tss_id=hg_231546.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DYI9 | + | |uniprot_id=B4DYI9 |
}} | }} | ||
Revision as of 12:03, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 96875585 |
|---|---|
| End of the center position in the TSS region: | 96875586 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000289032.12 AK302460 |
|---|---|
| Distance: | 8 |
| Num_trans: | 3 |
| All_trans: | ENST00000289032.12:8 AK302460:8 ENST00000498811.2:-33 |
TATA-Box annotation
| Distance to TSS: | 6686 |
|---|---|
| Nearest PromoterID: | NR_038890 |
| Entrez ID: | 100132781 |
| Nearest Unigene: | Hs.710921 |
| Nearest Refseq: | NR_038890 |
| Nearest Ensembl: | |
| Gene Name: | zinc finger protein 782 |
| Gene Alias: | - |
| Gene Description: | cyclin Y like 1 pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.075 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 10(CCGTTTATAAAC,-,0.00) |
