Difference between revisions of "TSS:Hg 232222.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000642197.1:68 ENST00000642920.2:68 NM_001368265:68 NM_017433:68 AK310494:68 AF229172:106 GQ891517:106 AY101367:106 ENST00000376302.5:113 BC036079:113 BC045538:115 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=68 |
| − | |distance_to_tss= | + | |distance_to_tss=67464 |
|end=247466 | |end=247466 | ||
|end_of_center_position=25934161 | |end_of_center_position=25934161 | ||
| − | |entrez_id= | + | |entrez_id=10771 |
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| − | |gene_alias= | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
| − | |gene_description= | + | |gene_description=zinc finger MYND-type containing 11 |
| − | |gene_name= | + | |gene_id=53904 |
| − | | | + | |gene_name=myosin IIIA |
| + | |gene_source=HGNC:7601 | ||
| + | |gene_symbol=MYO3A | ||
| + | |gene_synonyms= | ||
| + | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7601 | ||
|hsa-mir-7641-2= | |hsa-mir-7641-2= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000015171 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001202467 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006624 |
| − | |nearest_unigene= | + | |nearest_unigene=Hs.292265 |
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=247450 | |start=247450 | ||
|start_of_center_position=25934160 | |start_of_center_position=25934160 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000642197.1 ENST00000642920.2 NM_001368265 NM_017433 AK310494 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232222.1 | |tss_id=hg_232222.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q8NEV4 | ||
}} | }} | ||
Revision as of 12:19, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 25934160 |
|---|---|
| End of the center position in the TSS region: | 25934161 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000642197.1 ENST00000642920.2 NM_001368265 NM_017433 AK310494 |
|---|---|
| Distance: | 68 |
| Num_trans: | 11 |
| All_trans: | ENST00000642197.1:68 ENST00000642920.2:68 NM_001368265:68 NM_017433:68 AK310494:68 AF229172:106 GQ891517:106 AY101367:106 ENST00000376302.5:113 BC036079:113 BC045538:115 |
TATA-Box annotation
| Distance to TSS: | 67464 |
|---|---|
| Nearest PromoterID: | NM_001202467 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | myosin IIIA |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
