Difference between revisions of "TSS:Hg 232229.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000651885.1:51 AK290174:51 ENST00000651441.1:52 AK223600:55 BC004258:56 ENST00000679398.1:57 ENST00000420266.6:-78 ENST00000424454.5:91 AF116666:91 JF432760:129 KJ902580:129 AB590052:131 ENST00000347934.8:-136 ENST00000530865.5:148 AK297460:148 BC001654:-264 ENST00000442148.6:300 ENST00000448193.5:314 ENST00000354911.9:-331 NM_016628:-331 NM_100486:-331 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=51 |
| − | |distance_to_tss=- | + | |distance_to_tss=-364 |
|end=27983374 | |end=27983374 | ||
|end_of_center_position=28533449 | |end_of_center_position=28533449 | ||
| Line 11: | Line 11: | ||
|gene_alias=CILD23 | |gene_alias=CILD23 | ||
|gene_description=armadillo repeat containing 4 | |gene_description=armadillo repeat containing 4 | ||
| − | |gene_id= | + | |gene_id=51322 |
| − | |gene_name= | + | |gene_name=WW domain containing adaptor with coiled-coil |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:17327 |
| − | |gene_symbol= | + | |gene_symbol=WAC |
| − | |gene_synonyms= | + | |gene_synonyms=BM-016 FLJ31290 MGC10753 PRO1741 Wwp4 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:17327 |
|nearest_ensembl=ENSG00000169126 | |nearest_ensembl=ENSG00000169126 | ||
|nearest_promoter_id=NM_001312689 | |nearest_promoter_id=NM_001312689 | ||
|nearest_refseq=NM_018076 | |nearest_refseq=NM_018076 | ||
|nearest_unigene=Hs.127530 | |nearest_unigene=Hs.127530 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=27983373 | |start=27983373 | ||
|start_of_center_position=28533448 | |start_of_center_position=28533448 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000651885.1 AK290174 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232229.1 | |tss_id=hg_232229.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A494C0S5 |
}} | }} | ||
Revision as of 12:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28533448 |
|---|---|
| End of the center position in the TSS region: | 28533449 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000651885.1 AK290174 |
|---|---|
| Distance: | 51 |
| Num_trans: | 21 |
| All_trans: | ENST00000651885.1:51 AK290174:51 ENST00000651441.1:52 AK223600:55 BC004258:56 ENST00000679398.1:57 ENST00000420266.6:-78 ENST00000424454.5:91 AF116666:91 JF432760:129 KJ902580:129 AB590052:131 ENST00000347934.8:-136 ENST00000530865.5:148 AK297460:148 BC001654:-264 ENST00000442148.6:300 ENST00000448193.5:314 ENST00000354911.9:-331 NM_016628:-331 NM_100486:-331 |
TATA-Box annotation
| Distance to TSS: | -364 |
|---|---|
| Nearest PromoterID: | NM_001312689 |
| Entrez ID: | 55130 |
| Nearest Unigene: | Hs.127530 |
| Nearest Refseq: | NM_018076 |
| Nearest Ensembl: | ENSG00000169126 |
| Gene Name: | WW domain containing adaptor with coiled-coil |
| Gene Alias: | CILD23 |
| Gene Description: | armadillo repeat containing 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
