Difference between revisions of "TSS:Hg 232286.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FAM35EP= | |FAM35EP= | ||
| + | |all_trans=ENST00000581492.3:8 NM_016204:8 AK314956:44 AF188285:63 BC069643:141 BC074921:192 EU446620:223 EU446952:223 | ||
|bA38L15.1= | |bA38L15.1= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=8 |
|distance_to_tss=5696 | |distance_to_tss=5696 | ||
|end=46646280 | |end=46646280 | ||
| Line 10: | Line 11: | ||
|entrez_id=414241 | |entrez_id=414241 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=FAM35B | + | |gene_alias=FAM35B{{!}}FAM35BP{{!}}FAM35EP{{!}}bA38L15.1 |
| − | |gene_description= | + | |gene_description=shieldin complex subunit 2 pseudogene 1 |
| − | |gene_name= | + | |gene_id=2658 |
| + | |gene_name=growth differentiation factor 2 | ||
| + | |gene_source=HGNC:4217 | ||
| + | |gene_symbol=GDF2 | ||
| + | |gene_synonyms=BMP-9 BMP9 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:4217 | ||
|nearest_ensembl=ENSG00000165874 | |nearest_ensembl=ENSG00000165874 | ||
|nearest_promoter_id=NR_027632 | |nearest_promoter_id=NR_027632 | ||
|nearest_refseq=NM_001098846 | |nearest_refseq=NM_001098846 | ||
|nearest_unigene=Hs.594331 | |nearest_unigene=Hs.594331 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=46646279 | |start=46646279 | ||
|start_of_center_position=47322445 | |start_of_center_position=47322445 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000581492.3 NM_016204 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232286.1 | |tss_id=hg_232286.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q9UK05 | ||
}} | }} | ||
Revision as of 12:20, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47322445 |
|---|---|
| End of the center position in the TSS region: | 47322446 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000581492.3 NM_016204 |
|---|---|
| Distance: | 8 |
| Num_trans: | 8 |
| All_trans: | ENST00000581492.3:8 NM_016204:8 AK314956:44 AF188285:63 BC069643:141 BC074921:192 EU446620:223 EU446952:223 |
TATA-Box annotation
| Distance to TSS: | 5696 |
|---|---|
| Nearest PromoterID: | NR_027632 |
| Entrez ID: | 414241 |
| Nearest Unigene: | Hs.594331 |
| Nearest Refseq: | NM_001098846 |
| Nearest Ensembl: | ENSG00000165874 |
| Gene Name: | growth differentiation factor 2 |
| Gene Alias: | FAM35B|FAM35BP|FAM35EP|bA38L15.1 |
| Gene Description: | shieldin complex subunit 2 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.005 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
