Difference between revisions of "TSS:Hg 232347.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MAWBP= | |MAWBP= | ||
|MAWDBP= | |MAWDBP= | ||
| − | |all_trans= | + | |all_trans=CU675917:-63 AB527408:-63 KJ892707:-63 BC004182:-96 BC017228:-96 BC008071:-104 AK315585:-116 U41387:-117 ENST00000354185.9:-119 NM_004728:-119 BC009432:-119 ENST00000620315.1:151 NM_001256910:151 CR749598:151 BC104671:-161 LP895197:-161 BX648405:383 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-63 |
| − | |distance_to_tss=- | + | |distance_to_tss=-5595 |
|end=68338525 | |end=68338525 | ||
|end_of_center_position=68956289 | |end_of_center_position=68956289 | ||
|entrez_id=64081 | |entrez_id=64081 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=HEL-S-306 | + | |gene_alias=HEL-S-306{{!}}MAWBP{{!}}MAWDBP |
|gene_description=phenazine biosynthesis like protein domain containing | |gene_description=phenazine biosynthesis like protein domain containing | ||
| − | |gene_id= | + | |gene_id=9188 |
| − | |gene_name= | + | |gene_name=DExD-box helicase 21 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:2744 |
| − | |gene_symbol= | + | |gene_symbol=DDX21 |
| − | |gene_synonyms= | + | |gene_synonyms=GURDB RH-II/GU |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:2744 |
|nearest_ensembl=ENSG00000108187 | |nearest_ensembl=ENSG00000108187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001033083 |
|nearest_refseq=NM_022129 | |nearest_refseq=NM_022129 | ||
|nearest_unigene=Hs.198158 | |nearest_unigene=Hs.198158 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=68338520 | |start=68338520 | ||
|start_of_center_position=68956288 | |start_of_center_position=68956288 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=CU675917 AB527408 KJ892707 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232347.1 | |tss_id=hg_232347.1 | ||
Revision as of 12:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68956288 |
|---|---|
| End of the center position in the TSS region: | 68956289 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU675917 AB527408 KJ892707 |
|---|---|
| Distance: | -63 |
| Num_trans: | 17 |
| All_trans: | CU675917:-63 AB527408:-63 KJ892707:-63 BC004182:-96 BC017228:-96 BC008071:-104 AK315585:-116 U41387:-117 ENST00000354185.9:-119 NM_004728:-119 BC009432:-119 ENST00000620315.1:151 NM_001256910:151 CR749598:151 BC104671:-161 LP895197:-161 BX648405:383 |
TATA-Box annotation
| Distance to TSS: | -5595 |
|---|---|
| Nearest PromoterID: | NM_001033083 |
| Entrez ID: | 64081 |
| Nearest Unigene: | Hs.198158 |
| Nearest Refseq: | NM_022129 |
| Nearest Ensembl: | ENSG00000108187 |
| Gene Name: | DExD-box helicase 21 |
| Gene Alias: | HEL-S-306|MAWBP|MAWDBP |
| Gene Description: | phenazine biosynthesis like protein domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
