Difference between revisions of "TSS:Hg 232356.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PRG= | |PRG= | ||
|PRG1= | |PRG1= | ||
| − | |all_trans= | + | |all_trans=ENST00000373208.5:-14 AF358666:-14 AJ345098:-14 AB462932:-15 BC140263:-15 ENST00000373207.2:-311 NM_080722:-311 NM_139155:-311 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-14 |
| − | |distance_to_tss= | + | |distance_to_tss=16033 |
|end=69104145 | |end=69104145 | ||
|end_of_center_position=70672817 | |end_of_center_position=70672817 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.358209 | |gc_percent=0.358209 | ||
| − | |gene_alias=PPG | + | |gene_alias=PPG{{!}}PRG{{!}}PRG1 |
|gene_description=serglycin | |gene_description=serglycin | ||
| − | |gene_name= | + | |gene_id=140766 |
| + | |gene_name=ADAM metallopeptidase with thrombospondin type 1 motif 14 | ||
| + | |gene_source=HGNC:14899 | ||
| + | |gene_symbol=ADAMTS14 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14899 | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002727 |
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=69104127 | |start=69104127 | ||
|start_of_center_position=70672816 | |start_of_center_position=70672816 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000373208.5 AF358666 AJ345098 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232356.1 | |tss_id=hg_232356.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q8WXS8 | ||
}} | }} | ||
Revision as of 12:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70672816 |
|---|---|
| End of the center position in the TSS region: | 70672817 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373208.5 AF358666 AJ345098 |
|---|---|
| Distance: | -14 |
| Num_trans: | 8 |
| All_trans: | ENST00000373208.5:-14 AF358666:-14 AJ345098:-14 AB462932:-15 BC140263:-15 ENST00000373207.2:-311 NM_080722:-311 NM_139155:-311 |
TATA-Box annotation
| Distance to TSS: | 16033 |
|---|---|
| Nearest PromoterID: | NM_002727 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | ADAM metallopeptidase with thrombospondin type 1 motif 14 |
| Gene Alias: | PPG|PRG|PRG1 |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.358209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
