Difference between revisions of "TSS:Hg 232773.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|UNR= | |UNR= | ||
| + | |all_trans=ENST00000537345.5:55 NM_001160233:55 AK295095:55 EU176649:-305 DQ891882:-305 LF352804:-375 MA588381:-375 AK308418:-404 AK314777:-484 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=55 |
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=114757974 | |end=114757974 | ||
|end_of_center_position=116373812 | |end_of_center_position=116373812 | ||
|entrez_id=7812 | |entrez_id=7812 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=D1S155E | + | |gene_alias=D1S155E{{!}}UNR |
|gene_description=cold shock domain containing E1 | |gene_description=cold shock domain containing E1 | ||
| − | |gene_name= | + | |gene_id=476 |
| + | |gene_name=ATPase Na+/K+ transporting subunit alpha 1 | ||
| + | |gene_source=HGNC:799 | ||
| + | |gene_symbol=ATP1A1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:799 | ||
|nearest_ensembl=ENSG00000009307 | |nearest_ensembl=ENSG00000009307 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001007553 |
|nearest_refseq=NM_007158 | |nearest_refseq=NM_007158 | ||
|nearest_unigene=Hs.69855 | |nearest_unigene=Hs.69855 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=114757957 | |start=114757957 | ||
|start_of_center_position=116373811 | |start_of_center_position=116373811 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000537345.5 NM_001160233 AK295095 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232773.1 | |tss_id=hg_232773.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=P05023 | ||
}} | }} | ||
Revision as of 12:32, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116373811 |
|---|---|
| End of the center position in the TSS region: | 116373812 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000537345.5 NM_001160233 AK295095 |
|---|---|
| Distance: | 55 |
| Num_trans: | 9 |
| All_trans: | ENST00000537345.5:55 NM_001160233:55 AK295095:55 EU176649:-305 DQ891882:-305 LF352804:-375 MA588381:-375 AK308418:-404 AK314777:-484 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001007553 |
| Entrez ID: | 7812 |
| Nearest Unigene: | Hs.69855 |
| Nearest Refseq: | NM_007158 |
| Nearest Ensembl: | ENSG00000009307 |
| Gene Name: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Alias: | D1S155E|UNR |
| Gene Description: | cold shock domain containing E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
