Difference between revisions of "TSS:Hg 232774.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|UNR= | |UNR= | ||
| − | |all_trans= | + | |all_trans=ENST00000369496.8:146 NM_001160234:146 AK296362:146 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=146 |
| − | |distance_to_tss= | + | |distance_to_tss=-16 |
|end=114758000 | |end=114758000 | ||
|end_of_center_position=116383224 | |end_of_center_position=116383224 | ||
|entrez_id=7812 | |entrez_id=7812 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=D1S155E | + | |gene_alias=D1S155E{{!}}UNR |
|gene_description=cold shock domain containing E1 | |gene_description=cold shock domain containing E1 | ||
| − | |gene_id= | + | |gene_id=476 |
| − | |gene_name= | + | |gene_name=ATPase Na+/K+ transporting subunit alpha 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:799 |
| − | |gene_symbol= | + | |gene_symbol=ATP1A1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:799 |
|nearest_ensembl=ENSG00000009307 | |nearest_ensembl=ENSG00000009307 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_007158 |
|nearest_refseq=NM_007158 | |nearest_refseq=NM_007158 | ||
|nearest_unigene=Hs.69855 | |nearest_unigene=Hs.69855 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=114757999 | |start=114757999 | ||
|start_of_center_position=116383223 | |start_of_center_position=116383223 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000369496.8 NM_001160234 AK296362 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232774.1 | |tss_id=hg_232774.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P05023 |
}} | }} | ||
Revision as of 12:32, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116383223 |
|---|---|
| End of the center position in the TSS region: | 116383224 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000369496.8 NM_001160234 AK296362 |
|---|---|
| Distance: | 146 |
| Num_trans: | 3 |
| All_trans: | ENST00000369496.8:146 NM_001160234:146 AK296362:146 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_007158 |
| Entrez ID: | 7812 |
| Nearest Unigene: | Hs.69855 |
| Nearest Refseq: | NM_007158 |
| Nearest Ensembl: | ENSG00000009307 |
| Gene Name: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Alias: | D1S155E|UNR |
| Gene Description: | cold shock domain containing E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
