Difference between revisions of "TSS:Hg 232884.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000482265.1:-415 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-415 |
|distance_to_tss=3430 | |distance_to_tss=3430 | ||
|end=2130781 | |end=2130781 | ||
| Line 8: | Line 9: | ||
|entrez_id=619552 | |entrez_id=619552 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=MIRN483 | + | |gene_alias=MIRN483{{!}}hsa-mir-483{{!}}mir-483 |
|gene_description=microRNA 483 | |gene_description=microRNA 483 | ||
| − | |gene_name= | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
|hsa-mir-483= | |hsa-mir-483= | ||
|mir-483= | |mir-483= | ||
| Line 18: | Line 24: | ||
|nearest_refseq=NR_030158 | |nearest_refseq=NR_030158 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=2130777 | |start=2130777 | ||
|start_of_center_position=12616274 | |start_of_center_position=12616274 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000482265.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232884.1 | |tss_id=hg_232884.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:34, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12616274 |
|---|---|
| End of the center position in the TSS region: | 12616275 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000482265.1 |
|---|---|
| Distance: | -415 |
| Num_trans: | 1 |
| All_trans: | ENST00000482265.1:-415 |
TATA-Box annotation
| Distance to TSS: | 3430 |
|---|---|
| Nearest PromoterID: | NR_030158 |
| Entrez ID: | 619552 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030158 |
| Nearest Ensembl: | ENSG00000207805 |
| Gene Name: | dehydrogenase/reductase 3 |
| Gene Alias: | MIRN483|hsa-mir-483|mir-483 |
| Gene Description: | microRNA 483 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
