Difference between revisions of "TSS:Hg 233276.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MHP2= | |MHP2= | ||
| − | |all_trans= | + | |all_trans=NM_001377301:0 ENST00000679176.1:7 ENST00000367993.7:10 NM_004550:10 BC008868:10 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=11880 |
|end=160127639 | |end=160127639 | ||
|end_of_center_position=161199305 | |end_of_center_position=161199305 | ||
|entrez_id=477 | |entrez_id=477 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=FHM2 | + | |gene_alias=FHM2{{!}}MHP2 |
|gene_description=ATPase Na+/K+ transporting subunit alpha 2 | |gene_description=ATPase Na+/K+ transporting subunit alpha 2 | ||
| − | |gene_id= | + | |gene_id=4720 |
| − | |gene_name= | + | |gene_name=NADH:ubiquinone oxidoreductase core subunit S2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:7708 |
| − | |gene_symbol= | + | |gene_symbol=NDUFS2 |
| − | |gene_synonyms= | + | |gene_synonyms=CI-49 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:7708 |
|nearest_ensembl=ENSG00000018625 | |nearest_ensembl=ENSG00000018625 | ||
|nearest_promoter_id=NM_000702 | |nearest_promoter_id=NM_000702 | ||
|nearest_refseq=NM_000702 | |nearest_refseq=NM_000702 | ||
|nearest_unigene=Hs.34114 | |nearest_unigene=Hs.34114 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=160127638 | |start=160127638 | ||
|start_of_center_position=161199304 | |start_of_center_position=161199304 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001377301 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233276.1 | |tss_id=hg_233276.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:43, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 161199304 |
|---|---|
| End of the center position in the TSS region: | 161199305 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001377301 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | NM_001377301:0 ENST00000679176.1:7 ENST00000367993.7:10 NM_004550:10 BC008868:10 |
TATA-Box annotation
| Distance to TSS: | 11880 |
|---|---|
| Nearest PromoterID: | NM_000702 |
| Entrez ID: | 477 |
| Nearest Unigene: | Hs.34114 |
| Nearest Refseq: | NM_000702 |
| Nearest Ensembl: | ENSG00000018625 |
| Gene Name: | NADH:ubiquinone oxidoreductase core subunit S2 |
| Gene Alias: | FHM2|MHP2 |
| Gene Description: | ATPase Na+/K+ transporting subunit alpha 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
